KEGG   Cucumis sativus (cucumber): 101212319
Entry
101212319         CDS       T02486                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03420  Nucleotide excision repair
csv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101212319
  09124 Replication and repair
   03420 Nucleotide excision repair
    101212319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csv04121]
    101212319
   03400 DNA repair and recombination proteins [BR:csv03400]
    101212319
Ubiquitin system [BR:csv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101212319
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101212319
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I WD_LRWD1 WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 101212319
NCBI-ProteinID: XP_004143155
UniProt: A0A0A0KE33
LinkDB
Position
6:complement(12178650..12184552)
AA seq 562 aa
MPPTTRSLSFPRVIVEKDTDSEHSSSEEEEEEDDEEPLDDEDEDENGKSFENEGQRIEEE
SSKKGKAPITLSLKKVCKVCKRTGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHRVA
TEFGVIPASHKNTRNALLYVFERQFKPHIPPIKPAYVIPDQVNCAVIRYHSRRVTCLEFH
PTNNRLLLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRFSPTNDGMIYAASSDGTI
SCTDMETGFSSPLMNLNPDGWQGPNSWRMLYGMDINPEKHTVFVADNFGFLYLVDTRSNN
RSGQAVLIHKKGSKVVGLHCNPLQPDLLLSCGNDHFARIWDIRRLVVGSSLYDLAHRRVV
NSAYFSPISGCKILTTSQDNRIRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKD
PSESLAVVGRYISENYNGIALHPIDFIDVSSGQLVAEVMDPNITTISPVNKLHPRDDVLA
SGSSRSLFIWRPKDDHELVEQKDERKIVICTGTEKKRKHKSKNDESEDDSDVDKPTPTAK
GKNLKSRKPITEIRKTSQKMKR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgcctccgaccaccagaagtctctcatttccccgagtgatcgttgagaaggacaccgac
tccgagcacagttcgtcggaagaggaagaggaagaggacgacgaagagcctcttgacgac
gaagatgaagacgagaatggtaaaagcttcgaaaatgaaggccaaaggatcgaagaggag
tccagcaagaagggaaaagcacccattactctcagccttaagaaagtgtgcaaagtttgt
aaaaggactggtcatgaagcgggatttaaaggagctacgtacattgattgccctatgaaa
ccatgttttctatgcaagatgcctggacatacaacaatgacatgcccgcatcgggtggca
actgagtttggtgttattccggcatcccataagaatactcgcaatgcacttttatacgtt
tttgagcgccagtttaagccacatattcctcctatcaaaccagcatatgtgatcccagat
caagtgaactgtgcagttataaggtaccatagtaggcgtgtaacatgccttgagttccat
cctacaaacaaccggcttcttttatctggagataagaaaggacaagttggagtttgggat
tatgataaagtgcacgagaaggtagtctatggaaatatacactcttgtatagttaataac
atgagattcagtcctacaaatgatggtatgatatatgctgcatcttctgatggaaccatt
agttgcactgatatggagactggattttcttctccattaatgaatctcaaccctgatggt
tggcagggccctaatagttggaggatgctatatggtatggatatcaacccagagaagcac
actgtgtttgttgctgataattttggtttcctatatttggtggatacaaggtccaataat
agatctgggcaggctgttttgatccataagaagggtagcaaagttgttggactgcactgc
aatcctcttcaacctgatctgctcttgagttgcggaaatgatcattttgctcgaatatgg
gacattcgccgattagtagttggatcttccttgtatgatctcgcacacagacgtgtcgta
aattctgcttatttttctcccatatctggttgcaaaattcttacgacttctcaggataac
cgcattcgtgtatgggattctatatttggcaacttggattcaccaagtcgagaaattgtg
cacagtcatgattttaatcgacatttgactccttttcgagcagaatgggatccaaaggac
ccatctgaatcccttgcagttgtcggtcgttacataagtgaaaactataatggaattgcc
ttacaccctatcgattttatcgacgtcagctcagggcaattagttgctgaggtaatggat
cctaacataaccacaattagtccagtgaacaagctgcatccacgagatgatgttttggcg
tctgggagttcaaggtcgctgttcatttggcggccaaaggatgaccacgaacttgtagag
cagaaggacgaaagaaaaattgttatttgtaccggaacagagaagaaacggaagcacaag
tcgaaaaatgatgaaagtgaggatgattcggacgtggataagcctaccccaaccgcaaaa
ggcaaaaacttgaagtcaaggaagcctataactgaaataaggaaaacttctcaaaaaatg
aaacgttaa

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