Cucumis sativus (cucumber): 101212476
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Entry
101212476 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101212476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101212476
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101212476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
101212476
NCBI-ProteinID:
XP_011654516
LinkDB
All DBs
Position
5:complement(13242139..13260520)
Genome browser
AA seq
1490 aa
AA seq
DB search
MALDEDVVLRDVTNAGVVITDRIAREVATQLDLEESLEASRYATDPYTTHPREWPPLVEV
VDTWELPPVLIERYNAAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEFNVE
EQAICAVGLTKSKPGVFVEAIQYLLILATPAELILVGVCSSGGADGMDPYAEVSLQPLPE
YTIASDGVTMTCITCTDKGRIFLAGRDGNIYELHYTSGSGWQKRCRKICLTSGLGGVISR
WVVPNVFKFGAVDPIVEMIYDSERCILYTRTEEMKVQVFVLGSNGDGPLKKVAEERNLIN
QRNGSYGSRQTKGPRAMSRSPMPSIVCISLLSTLESKSLHLLAVLSDGRRMYLTTSPSNG
NMGAYNSSLQTPSCLKVVATRPSPPLGVGGGLTFGANSISGRPQNEELLPKVETAFYSAG
TLVLSDSSPPTISSLLLVSKDPVAQSSMSGTSALNARTSFALREIVYSLPVEGRMLFVAD
VLPLPDAASTMQSLYSQIEFGVSDLPDEHSEKAVGKLWARGDLSTQHILPRRRLVVFSTM
GMMDIAFNRPVDILRRLFESNSPRSILEDFFKRFGAGEAAAMCLMLASRIVHCESLITNV
IADKAGEAFEDPRIVGMPQLGGNTAVSDTRTAAGGFSMGQVAEEAVPVFSGAHEGLCLCS
SRLLFPLWELPVVALKGISDSTTTSHNGLVVCRLSAGAMQILENKLRALEKFLRSRRNQR
RGLYGCVAGLGDVTGSILYGSGSDLVSSDRNMVKSIFGAYTRNMESAGTGTSNKRQRLPY
SPAELAAMEVRAMECIRQLLLRSAEALFLLQLLSQHHLTRLVQGLDDSFRQAIAQLTFNQ
LVCSSEGDNLATRLISALMQYYTGPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECL
ERAAVALDPMEKENLAREAFNCLSKIPESADLRTVCKRFEDLRFYEAVVRLPLQKAQALD
PGCNACNDQTDLAARECALSEREQCYEIIISALRSLKGDVSLKEFGSPMKPAASRAIPDM
ATRSKYISQIVQLGVQSPDKIFHNYLYRSMIDLGLDNELLEYGGPDLVPFLQNAGRHPIQ
EVRAVSALTAGASPIGQSGAVGATNEAKYFDLLARYYVMKRQHLLAAHVLLRLAGRRSSD
PGDVLTLEERCQYLSNAVLQAKNANSSKGLAGSTPDTLDNGLLEQLEGKLAVLRFQMKIK
EELEALASRIESVASTSDSVQNEMMTDNDLAANSIISNTARQKAKELSLELKTITQLYNE
YAVPFELWEICLEMLYFANYSSDGNTSIIRETWARLIDQTLSTGGIAEACSVLKRVGVNI
YPGDGGGIPLESLCLHLEKAALERSESGVESIGNDDVARALIAVCKGATEPVLNAYDQLL
LNGAILPSPKLRLRLLQSVLVVLHEWAMSISSQTVGRSATAASLVLAGKYSLDQIAIFNQ
GVRDKIAIAANRYMTEVRRLALPQNQTEAVYRGFKELEESLVSSFSFSQF
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggcattggatgaggacgtcgtcctgcgcgatgtcaccaatgctggtgttgtcatcact
gaccgcattgccagagaagttgccacccaacttgatctggaggaatcgctggaagcttca
agatacgctactgatccctatacaacccaccccagggagtggcctcctctagtggaagtg
gtggatacttgggagttacctccagtgctcatagaaagatataatgctgctggtggggaa
ggaactgccttatgtggaatatttccagagatacgaagagcttgggcatctgttgacaat
tctttatttctttggcgatttgacaagcgggatggtcaatgtcctgagtttaatgtggag
gagcaagccatctgtgctgttgggctaaccaaatccaagcctggtgtttttgttgaggca
atacaatatcttttgattctagctacaccagcagagttgattcttgtaggagtatgctct
tctggtggtgctgatgggatggatccgtatgcagaggtttcgctccagcctttgccagag
tataccattgcgtcagatggggtcactatgacttgcatcacttgcactgacaaaggaaga
atttttttggctggtcgtgatggcaacatttacgagcttcattacacatctggttctggt
tggcaaaagcgatgtcgtaaaatttgccttacttctggtttaggaggtgtgatatcaaga
tgggttgtgccaaatgtattcaagtttggagctgttgatcccattgttgaaatgatctat
gatagtgaaagatgcattttatatacaagaactgaggaaatgaaagtccaagtatttgtg
ttgggatccaatggtgacggaccgcttaagaaagtagcagaagaaagaaatttgatcaat
cagagaaatggatcttatggaagtagacagacaaaaggacccagagctatgagtcgatca
ccaatgccatctattgtctgcatatcactcttatctacacttgaatcaaagtcattgcac
cttctagcggttttatcagatggtagaaggatgtatttaaccacttcaccatcaaatgga
aacatgggtgcatataattccagccttcagacgccaagttgtttaaaagttgtggctaca
aggccttctcctcctctaggtgttggcggaggacttacatttggtgccaactctatttct
ggtagacctcaaaatgaagagctgttgccgaaggtcgagacagcattttactctgctggg
actctagttctctctgattcatcaccaccaactatatcttcacttctccttgtgagcaag
gatcctgtagcacaatcttccatgtctggtacttcagccttaaatgcaaggacttctttt
gctttaagggaaattgtttattctcttcctgttgaaggtcgaatgctttttgtagcagat
gttttgcccttaccagatgctgcatccactatgcaatctttatattcacagattgaattt
ggggtatcagatttaccagacgagcatagtgaaaaagcagttggaaaactatgggcgaga
ggagacctatctacccaacacatattacctagaaggagacttgttgtattcagtaccatg
ggcatgatggatattgctttcaacaggcctgtggatattttgagaaggttgttcgagtct
aattcaccaagatcgattttagaagacttcttcaaaaggtttggagctggtgaagcggct
gccatgtgtctaatgttggcttcaaggattgtccactgtgaaagtctcataaccaatgtt
attgcagacaaggcaggtgaagcttttgaggatccaagaattgttgggatgcctcagctt
ggaggcaatactgctgtgtcagacacaagaactgctgctggtgggtttagcatgggtcag
gttgctgaggaggctgtgccagtattttcaggtgcacatgaagggctctgcttgtgttca
tcaaggttgctttttccactctgggaacttcctgtcgtggctcttaaaggtatatcagat
tctacaactacttcacacaatggactagttgtttgtagactttctgctggagccatgcaa
atccttgagaataagctccgtgctcttgaaaagttcctaaggtcgagaaggaaccagaga
agaggtctttacggttgtgtagctggcttgggagatgttactggttctattctttacggt
agtggttcagatcttgtatctagtgatcggaatatggtaaaaagcatttttggtgcatac
acaagaaacatggaatctgctgggactggaacttctaacaaaaggcaaagattaccttac
agtcctgctgagttggcggccatggaggttagggcaatggagtgtattaggcaattgctg
cttagatctgctgaagctttatttttgcttcagcttctttctcaacatcacttaacacgc
ttggttcagggcttggatgatagttttaggcaggcaatagctcaattgacttttaatcag
cttgtttgttcatcagagggtgataatcttgctacaagacttatatctgctctaatgcag
tactatactggtcctgatggcaggggaactgtagatgacattagtgggaggttaagggaa
ggttgtccaagctactttaaagagtccgactataaatttttcttagccgtggaatgtctg
gagagagctgctgtagctcttgacccaatggagaaagagaatcttgctagggaagccttt
aattgtttgagtaaaatccctgagtctgcagatttacgaactgtatgcaaacgttttgag
gatttaagattctatgaagcagtggttcgtttgcctctgcagaaagcccaggctcttgac
cctggatgcaatgcttgtaatgatcaaactgatttggctgctcgagaatgtgcactttcc
gagcgtgaacagtgctatgaaataattataagtgctctacgttctctaaaaggtgatgtc
tcactgaaggaatttgggtctcctatgaagcctgctgcttcaagggccattcctgatatg
gcaacacgtagtaaatatatatcccagattgttcagcttggagtccaatcccctgacaaa
attttccataattacttatatcggtctatgattgatttggggcttgacaatgaattgtta
gagtacggaggaccagatttggtaccgttcctacaaaatgctggacggcatcccatacaa
gaggttcgagctgtctcagctctaacagctggggcttctccaattggtcaatctggagca
gttggtgcgacaaatgaagccaagtattttgatcttttagctcgatattatgttatgaag
cggcaacatttgcttgctgctcatgtgctgctaagactagctggtagacgctcatctgac
cctggggatgttcttactttagaggaaaggtgccaatacttgagcaatgcagttttacaa
gcaaaaaatgcaaacagtagcaagggtttggcaggttctacccctgatactttagacaat
ggattgcttgaacagctcgaagggaaacttgctgttcttcgtttccagatgaaaatcaag
gaggagctggaggctttagcttcaagaatagaatccgtggctagtacatctgattcagtc
caaaatgaaatgatgacagataatgatttggctgctaattccattatttcgaacactgct
cggcaaaaggctaaagaactatcattggagttaaagactataactcagctatataacgaa
tatgctgttccatttgagctatgggagatatgtttggaaatgctgtactttgcaaactat
tcttctgatggcaatactagtattatcagagaaacttgggcaagattaattgaccaaact
ctttctacgggcggcattgctgaagcttgttcagtacttaaaagggttggcgtcaacatt
taccctggtgatggaggtggaatacctttggagtctctttgtcttcaccttgagaaggct
gcattggagagatcagaatcaggtgttgaatctattgggaacgatgatgttgcaagagcc
cttattgctgtttgcaagggtgcaactgagccagtgttgaatgcttatgatcaattgttg
ttgaatggtgcaattctaccgtcacccaaactcaggttacgcctcctccaatctgtgtta
gtggtactccatgagtgggctatgtcaatatcttcacagactgtgggtagaagtgcaact
gcagcgtctctagttcttgctggaaaatactctttggatcaaatagctattttcaaccaa
ggggttcgggacaagatagccatcgctgctaacagatatatgactgaggttcgtaggtta
gcgctcccacaaaaccaaactgaggctgtctatcgaggctttaaggagcttgaagagtca
ctagttagttccttttcttttagtcaattttga
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