Cucumis sativus (cucumber): 101212698
Help
Entry
101212698 CDS
T02486
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00750
Vitamin B6 metabolism
csv01100
Metabolic pathways
csv01240
Biosynthesis of cofactors
Module
csv_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
101212698
Enzymes [BR:
csv01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
101212698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
Motif
Other DBs
NCBI-GeneID:
101212698
NCBI-ProteinID:
XP_004137720
UniProt:
A0A0A0LCT3
LinkDB
All DBs
Position
3:complement(28916468..28917790)
Genome browser
AA seq
308 aa
AA seq
DB search
MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNLNEKV
ERFANRSE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatctggtgttgtagcggtgtacggtaacggagctctcacggagacgaaacaa
tcccccttctctgtgaaagttggattggctcaaatgctccgcggcggtgtaattatggac
gtcgttaacgccgagcaggctcgtgtcgctgaagaggctggagcttgcgctgtcatggct
ctcgaaagagttcctgcagacatccgagcccaaggcggtgttgccagaatgagtgaccct
caactcatcaaggaaatcaaacaagctgttacgattccggtcatggcgaaggctcgaatc
ggtcatttcgttgaagctcagattcttgaggccattggtattgattatgtggatgagagc
gaagttcttactctcgctgatgaagaaaaccacatcaacaagcacaacttccgcattcct
tttgtttgtggctgccgtaacctcggtgaggcgctgcggcgtattcgtgaaggggcggca
atgatcagaaccaagggtgaggccggtaccggcaatatcattgaggctgtgcggcacgtg
cggtccgtgatgggggatatcaggttgttgaggaacatggacgacgatgaggtctttacc
tttgccaagaagatcgctgcgccatatgatttggtgctacagacgaagcagctcggcagg
cttccggttgttcaatttgccgctggtggtgtggccacgccggcagatgcagcgctgatg
atgcagctcggttgtgacggtgtattcgtcggctccggtgtgttcaagagcggcgaccca
gcgaggcgagccagagcgattgtgcaggctgttactcattacaacgatccggaggtgctg
gcggaagtgagctgtgggctcggtgaggctatggtcggactgaacttgaacgaaaaggtt
gaaaggttcgccaacagatcggagtag
DBGET
integrated database retrieval system
