Cucumis sativus (cucumber): 101212715
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Entry
101212715 CDS
T02486
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101212715
Enzymes [BR:
csv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
101212715
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Other ribosome biogenesis factors
101212715
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
FtsJ
RrnaAD
Methyltransf_31
PCMT
Methyltransf_4
RASSF8-10_RA
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
101212715
NCBI-ProteinID:
XP_004141333
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All DBs
Position
4:25240108..25244997
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AA seq
542 aa
AA seq
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METFMLEKLGSVTIHKVSTIDCREFGRGGYWEAMGRVNNRTKASASGAAGKSEMRRMSNA
DRSAYFARREAAKVLRRVLEGDAQRRAIASIKTLVYAPSVRNKKGTFALVCKTLKYLPVI
KDVVEAADLLSNKWKRQKELIYVIMYDILLGQKTHLAGDAEKFLMRQQSALQSAVTQLLS
KKKANNIEDLIARGDDGPGVSRPRFVRVNTLKMDVHTAIEELGKRYAVQKDDMVSDLLIL
PPGSDLHDHPLVADGSIFLQGKASSMVAVALDPKPGWEVLDACSAPGNKTVHLASLMHGK
GRVIACELNENRVKRLRHTIKLSGASNIDVLHGDFLNLNPKDPSLSKVRAILLDPSCSGS
GTAAVRLDHLLPSHAEGTISGDDLERLNKLAAFQRKALAHAFSFPAVEKIVYSTCSIHQI
ENEDVVQSVLPLAESRGFQLDTPFPRWQRRGLPVFAGANHLLRTDPVEDKEGFFIALFKK
KQNTTNPFPRSSNRDKSSRYRGGDVCNSWAVACPPTKISKLWLYQYALSTRTRWRKNHPI
QN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttttatgttagaaaagcttgggtcagtgaccattcataaggtttcgactatc
gactgtagggagttcggacgaggtggctactgggaagccatggggcgggttaacaacaga
accaaggcatcggcctcgggagccgccggcaaatcagaaatgaggcggatgagtaacgcc
gaccgttcggcatacttcgctaggagagaggcggcgaaggtattgcggcgtgttctcgag
ggagacgctcaacgtcgagccatagcttccatcaagacactcgtttatgctccatctgtt
cggaataagaagggcacattcgctcttgtttgcaagactctcaaatacctccctgtgatc
aaggacgtagttgaggctgctgatttattgagcaacaaatggaagaggcagaaggaatta
atttatgtcatcatgtatgatatccttctaggccagaaaactcatttagctggcgatgca
gagaagtttctcatgcggcagcaaagtgctttacaatctgctgttacccagcttttgtcg
aagaaaaaagcaaacaatattgaagatttaatagctcgtggtgatgatggtcctggtgtt
tcaaggccccgttttgttcgcgtgaatactttgaagatggatgttcacacagcaatagaa
gaactaggcaaaagatatgcagtgcagaaggatgacatggtttctgacctcttgatactt
cctccaggcagtgacttacatgatcatcctctggtcgcagatggaagtatcttcttgcaa
ggcaaggctagttccatggttgcagtagcccttgatcccaagccaggatgggaagtcctt
gatgcatgttcagctccgggtaacaaaactgtccaccttgcctctctcatgcatggaaaa
ggaagggtcattgcatgtgaattgaacgaaaacagggtcaaacgcttacgacatactatc
aaactatctggcgcttctaatatagacgttttgcatggggatttcctcaatcttaatcca
aaagatccttcattatccaaagtccgtgccattcttttggatccttcctgctctggatct
ggaactgcggctgtcagattagatcatttgctcccgtcacatgctgaagggacaatctct
ggagatgaccttgaacgactaaacaaactcgctgcctttcagagaaaggctcttgcacat
gcattttcctttccagccgtagagaaaattgtttacagcacttgttccattcatcaaatt
gaaaatgaagatgtcgtccagtcagtattacctcttgctgaatcacgtggctttcaacta
gatactccgttcccacggtggcagcgacgaggtctcccagtgtttgccggcgctaaccac
ttactccgaaccgatcctgttgaagacaaagaagggttcttcatagctctatttaaaaag
aagcagaacacgacgaacccatttccccgaagttcaaatagagataaaagctcaagatat
cgtggtggagatgtctgtaacagttgggctgtagcatgccctcctaccaagatctccaaa
ctatggttgtatcagtatgcactttcgacaaggacacgatggagaaagaaccaccccatc
caaaactag
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