KEGG   Cucumis sativus (cucumber): 101212755
Entry
101212755         CDS       T02486                                 
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03022  Basal transcription factors
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101212755
  09124 Replication and repair
   03420 Nucleotide excision repair
    101212755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101212755
   03400 DNA repair and recombination proteins [BR:csv03400]
    101212755
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101212755
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101212755
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 101212755
NCBI-ProteinID: XP_004152842
UniProt: A0A0A0LMM2
LinkDB
Position
2
AA seq 295 aa
MASAPSKLYADDVSLLVVLLDTNPFFWSTSALPFSKFLSHVLAFLNSILVLNQLNEVVVI
GTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSL
LSGSLSMALCYIQKVFRSGSLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSC
YIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRA
SCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVELDSVSKLKRKTPE
NT seq 888 nt   +upstreamnt  +downstreamnt
atggcttcagctccttcgaagctttacgcagatgatgttagccttttagtggttttactg
gatacgaatccatttttctggagcacatctgctcttccgttctccaagtttctgtctcat
gtacttgcttttctgaactccattttagttctgaaccaacttaatgaggttgtggttatt
ggtactggatatgcttcatgcaagtatttatacaactcgtcttcttactcaaatcatggc
cttgaagatggtagaatgcctgcactttgtactcgtttattgaagaatttggaggagttc
gtgattggggatgagcagtccatcaaggaagatcccaaaggagggaccatgtcttcactt
ctttctggatcgctctccatggccttgtgttatatacagaaagttttccgctctggatct
ctccatccccaaccacgaatcctttgcttgcagggatccccagatggtcctgaacaatat
gttgcaatcatgaatgccatcttttctgctcagcgttcaatggttcctatagattcatgt
tacattggttcccacaattctgcatttcttcagcaggcttcttacataacgggtggagtt
tatctgaagcctcagcaaatggatgggctgtttcagtatctctctactgtttttggcacc
gatttgcattcccggacctttttacagcttccaaaatctgttggtgtggattttcgtgca
tcgtgtttttgccacaagaaaacgatcgatatgggctatgtctgttctgtttgtttatct
atattctgcaagcatcacaagaaatgttctacctgtgggtcagtttttggtgagacacca
gtagaactcgattcagtgtctaaactgaagagaaaaactccagaatga

DBGET integrated database retrieval system