KEGG   Cucumis sativus (cucumber): 101212870
Entry
101212870         CDS       T02486                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
csv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101212870
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101212870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101212870
   04131 Membrane trafficking [BR:csv04131]
    101212870
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101212870
Membrane trafficking [BR:csv04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    101212870
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    101212870
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    101212870
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_WDR41 WD40_RFWD3 Beta-prop_WDR36-Utp21_2nd Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 101212870
NCBI-ProteinID: XP_004141658
UniProt: A0A0A0KCU3
LinkDB
Position
7:22366257..22367869
AA seq 301 aa
MPALKIDSGHQDTVHDVSMDYYGKRLATVSSDQTIKIIGVSNSASQHLATLTGHQGPVWQ
AAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLA
CGSSDGNISVFTARQDGGWDTSRIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVLKLCS
GGCDNTVKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW
TVAREGDQWEGKILSDFKTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgctctgaagatagatagtggtcaccaggacaccgtccatgatgtttcgatggat
tattatgggaagcgtcttgcaacagtttcatctgatcagaccattaagataattggagtc
agtaactcggcttctcagcatctagccacgcttactggtcaccaagggccagtttggcag
gctgcttgggcgcacccaaaatttgggtcgttgctggcttcgtgttcttatgatggacgt
gtgattatatggaaggagggcaatcagaacgagtggactcaagcccatgttttcgacgat
cataaatcctccgttaactctatcgcttgggctcctcatgaattgggtctgtgtttggca
tgtggttcctctgatgggaatatttcagtattcactgcaaggcaggatggtggttgggat
acatcaaggattgaccaagctcaccctcttggtgttacatcggtctcatgggctccttca
tctgcgccgggtgctcttgttggttctggcttggttgatcctgttctaaagctttgctct
ggtggttgtgataatactgtgaaggtctggaaaccgtataatggaatttggaagatggac
tgtttccctgcacttcagatgcatactgattgggttagggatgttgcatgggcgccgaac
ctcgggctaccaaaatctactattgcaagtgcttctcaggatggaaaagttatcatatgg
actgtagccagggaaggggatcaatgggaaggaaagatattgagtgatttcaaaactgcg
gtctggagggtctcatggtctttgactggaaacatcttggctgtggcggatgggaacaac
agtgtgactttgtggaaagaatctgttgatggggactggcaacaggtgacaacggtagag
ccatag

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