Cucumis sativus (cucumber): 101212922
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Entry
101212922 CDS
T02486
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101212922
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101212922
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
101212922
NCBI-ProteinID:
XP_004134494
UniProt:
A0A0A0LAM9
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Position
3:11048826..11050934
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AA seq
424 aa
AA seq
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MSSVFKQLILLTLLLVALVAVDAKLLAGPISPDPFLNVNLGKDIKHRKETVFNVLSFGAK
PDGKTDNSESFMKTWVAACHSKGAARVVIPRGTFLINQIAFAGPCASTSPIIVQIDATLK
GGVDISNYFSDEWILFEKINGLIVTGRGALDGQGSAVWEYNDCGMNPNCQKLPVNLKLNN
ITHGLVKGISSVNSKGFHMFVTNCENVRLRKLHLTAPEDSPNTDGIHLSRSNNIKISRSV
IATGDDCISLGRGSMNVAINKITCGPGHGISVGSLGKYPNEEDVRGIVVKNCTLLSTDNG
LRIKTWPDSPPSAASGILFQDINMVNVKNPILIDQEYSCSKTNCQRPPSRVKISDVHYIN
VKGSSISPVAVQLKCSKQFPCQNIEMFNINLKYSGPPNKELPFSAKCSNAKVGYRGLQFP
PPCK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgttttcaaacaacttattcttcttaccttgctattagtagcattggttgct
gttgacgccaagttgctcgccgggccgatctcgccggacccctttctaaatgtcaattta
gggaaggacattaaacatagaaaggaaacagtgtttaatgtgctgagttttggtgccaaa
cctgatggcaaaacagacaacagtgagagttttatgaagacatgggtagcagcatgtcac
tccaagggagctgcaagagttgttattcctcgtggtacttttttgatcaatcaaattgca
tttgctgggccatgtgcttctacaagtcctatcatcgttcaaattgatgcaacgttgaaa
ggaggcgtcgacattagcaattacttctcggatgaatggatattgtttgagaagatcaat
ggtttgattgtcactggcagaggtgctttagatggacaaggtagtgctgtttgggaatac
aatgattgtggtatgaatcctaattgccagaaactccctgttaatttaaaactcaataac
atcacacatgggcttgtgaaaggcattagttccgtcaacagcaaagggtttcatatgttc
gtcacgaactgtgagaatgttaggctaagaaaactgcacttaacagccccagaagacagt
ccaaacactgatggcatacatctcagccgctccaacaatatcaaaatatcgagatctgtc
attgccaccggtgacgattgcatctctctcggtcgaggatcaatgaatgtcgccatcaac
aaaatcacctgcggtccaggacacggtatcagtgtgggtagcctcggaaagtacccaaac
gaggaggacgtacgcggtattgtcgtgaagaactgcacattactaagcacggacaatgga
cttagaatcaaaacatggccagattcacccccaagtgctgcatcaggcatactattccaa
gacatcaatatggtcaatgtcaagaatcccatcctcatagaccaagaatacagctgctca
aaaaccaattgccaaagaccgccatcacgagtgaaaatcagtgatgttcattacataaat
gtgaaaggatcatcaatctctccagtagcagttcaactgaagtgcagtaagcaattccct
tgtcaaaacatcgagatgtttaatataaatttgaaatatagtggccctccaaataaagaa
ttaccatttagtgctaaatgtagcaatgcaaaagtaggttacagaggccttcaatttcca
cctccttgcaaatga
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