KEGG   Cucumis sativus (cucumber): 101213013
Entry
101213013         CDS       T02486                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csv04131]
    101213013
Membrane trafficking [BR:csv04131]
 Autophagy
  Other autophagy associated proteins
   Others
    101213013
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd CFAP251_N Beta-prop_RSE1_2nd Beta-prop_Vps41 Beta-prop_IFT140_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Nucleoporin_N Beta-prop_TEP1_2nd WD40_Gbeta PEP5_VPS11_N Izumo-Ig Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 101213013
NCBI-ProteinID: XP_004136045
UniProt: A0A0A0K960
LinkDB
Position
7:18380072..18382612
AA seq 420 aa
METLSAFPSPPWPNPNPNSNPSPNPNPNPNPNPPSAVADSSSSERFDSDSVSSVDPTGLS
PAVEPPASQPSLLHLSFNQDHGCFAAGTDRGFRIYNCDPFREIFRRDFDRGGGVGVVEML
FRCNILALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSAVRGVRLQRDRIIVILEQKV
FVYNFADLKLLHQIETIANPKGLCAVSQLSTSLVLVCPGLQKGQVRVEHYASRRTKFIMA
HDSRIACFALTTNGQLLATASTKGTLVRIFNTFDGNLLQEVRRGADRAEIYSLAFSSTAQ
WLAVSSDKGTVHVFSLKVNSGSLGNDMSHQNDSSLSVAPSGSSFSFIKGVLPKYFKSEWS
VAQFRLHEGSQYVVAFGHQKNTVVILGMDGSFYRCQFDSVNGGEMTQLEYHNFLMPEEAF
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggaaaccctctccgctttcccttcccctccatggcccaatcccaatcccaattccaat
cccagtcccaatcccaatcccaaccccaatcctaaccctccttccgccgtcgccgactct
tcctcctccgaacgctttgattccgattccgtctcatcggtggacccgacgggtttgtcc
ccggcggttgaacctcctgcttcgcagccttctctgcttcatctctccttcaatcaagat
catggctgctttgctgccgggactgaccgtgggtttcggatctacaattgcgatcccttt
agagagattttccggagggattttgaccgtggaggtggtgttggtgttgttgagatgctt
tttcgctgtaatattttggctcttgttggtggtggacccgaccctcagtatccgcccaat
aaggttatgatttgggatgatcatcagagccggtgtattggggagctttcgtttaggtct
gctgttcgtggtgttcgtttacagagagacaggattattgttattttggaacagaaggtt
tttgtttacaattttgcggatttgaagttgctgcatcagatcgaaactattgcgaaccct
aagggtctttgtgctgtttcccagttgagtacttcgctcgtgcttgtttgccctggatta
cagaaggggcaggttagggttgagcattatgcctctcgacggactaagtttattatggct
catgactcgagaattgcttgctttgcgcttacgaccaatgggcagttacttgctacagca
agtaccaagggaactctggttcggatattcaacacatttgatggaaatttacttcaagag
gtaaggagaggggcagatagagcagagatatacagtttggctttctcatcgactgcccaa
tggctggcagtctccagtgacaagggcaccgttcatgtattcagccttaaagtcaattct
ggatctcttgggaatgatatgtctcatcagaacgattcttctctttctgtggcaccatct
ggttcctcattttcctttatcaaaggtgtcttgccaaaatatttcaagtcggagtggtct
gttgctcagtttcgcttgcatgaaggctctcagtatgtcgttgcttttggtcaccagaag
aatacggttgtaatccttggaatggacggaagcttctaccgatgccaatttgattcggtg
aatggaggagagatgacacagcttgaatatcacaactttctaatgccggaggaagccttc
tag

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