Cucumis sativus (cucumber): 101213013
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Entry
101213013 CDS
T02486
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101213013
Membrane trafficking [BR:
csv04131
]
Autophagy
Other autophagy associated proteins
Others
101213013
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
CFAP251_N
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Nucleoporin_N
Beta-prop_TEP1_2nd
WD40_Gbeta
PEP5_VPS11_N
Izumo-Ig
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
101213013
NCBI-ProteinID:
XP_004136045
UniProt:
A0A0A0K960
LinkDB
All DBs
Position
7:18380072..18382612
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AA seq
420 aa
AA seq
DB search
METLSAFPSPPWPNPNPNSNPSPNPNPNPNPNPPSAVADSSSSERFDSDSVSSVDPTGLS
PAVEPPASQPSLLHLSFNQDHGCFAAGTDRGFRIYNCDPFREIFRRDFDRGGGVGVVEML
FRCNILALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSAVRGVRLQRDRIIVILEQKV
FVYNFADLKLLHQIETIANPKGLCAVSQLSTSLVLVCPGLQKGQVRVEHYASRRTKFIMA
HDSRIACFALTTNGQLLATASTKGTLVRIFNTFDGNLLQEVRRGADRAEIYSLAFSSTAQ
WLAVSSDKGTVHVFSLKVNSGSLGNDMSHQNDSSLSVAPSGSSFSFIKGVLPKYFKSEWS
VAQFRLHEGSQYVVAFGHQKNTVVILGMDGSFYRCQFDSVNGGEMTQLEYHNFLMPEEAF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctctccgctttcccttcccctccatggcccaatcccaatcccaattccaat
cccagtcccaatcccaatcccaaccccaatcctaaccctccttccgccgtcgccgactct
tcctcctccgaacgctttgattccgattccgtctcatcggtggacccgacgggtttgtcc
ccggcggttgaacctcctgcttcgcagccttctctgcttcatctctccttcaatcaagat
catggctgctttgctgccgggactgaccgtgggtttcggatctacaattgcgatcccttt
agagagattttccggagggattttgaccgtggaggtggtgttggtgttgttgagatgctt
tttcgctgtaatattttggctcttgttggtggtggacccgaccctcagtatccgcccaat
aaggttatgatttgggatgatcatcagagccggtgtattggggagctttcgtttaggtct
gctgttcgtggtgttcgtttacagagagacaggattattgttattttggaacagaaggtt
tttgtttacaattttgcggatttgaagttgctgcatcagatcgaaactattgcgaaccct
aagggtctttgtgctgtttcccagttgagtacttcgctcgtgcttgtttgccctggatta
cagaaggggcaggttagggttgagcattatgcctctcgacggactaagtttattatggct
catgactcgagaattgcttgctttgcgcttacgaccaatgggcagttacttgctacagca
agtaccaagggaactctggttcggatattcaacacatttgatggaaatttacttcaagag
gtaaggagaggggcagatagagcagagatatacagtttggctttctcatcgactgcccaa
tggctggcagtctccagtgacaagggcaccgttcatgtattcagccttaaagtcaattct
ggatctcttgggaatgatatgtctcatcagaacgattcttctctttctgtggcaccatct
ggttcctcattttcctttatcaaaggtgtcttgccaaaatatttcaagtcggagtggtct
gttgctcagtttcgcttgcatgaaggctctcagtatgtcgttgcttttggtcaccagaag
aatacggttgtaatccttggaatggacggaagcttctaccgatgccaatttgattcggtg
aatggaggagagatgacacagcttgaatatcacaactttctaatgccggaggaagccttc
tag
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