Cucumis sativus (cucumber): 101213034
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Entry
101213034 CDS
T02486
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101213034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101213034
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
RNases
101213034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
PTR
Motif
Other DBs
NCBI-GeneID:
101213034
NCBI-ProteinID:
XP_004141901
UniProt:
A0A0A0KLE2
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All DBs
Position
6
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AA seq
524 aa
AA seq
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MEDKIATAEKKVLVEMVRLTQKRGMTGSEGDWKEFLNSRDPKFGASMSDPSKRPNDLLIA
FLKTFDKEEDLMFLDKVFQCNEKRNFVKQVSQITPENESPEQKLVRLTLEHPQYPLEYSF
PSYDKEWVVTKFSQKSKGPNSNLIYAIDCEMVLCEDGTENLVRVCMVDRDLQVKIDELVK
PRKAIKDYRTDITGISPGDLDGVSCSLADVQKSITKFLSHGRTILVGHSLNNDLQALKLD
HSRVIDTSFIFKYSNGSIYRRPSLSKLCKSVLGYDLRKEGAPHNCLDDAQAAMKLVLAKL
ESKADDGIAIVDEDTPQVGMEKLLLHRIPINVPSEALAKAIHGDFTIELKPPKKGQGGDI
YSALAIFQNPKEALQAFEEVEGNAYEDSSGRPQKLIRFQHSGSIVSIYVRKMGQKDFMDN
FSSKKRDLEVIENIVMSKKQKTANKMEIETISNSSRCCNHVEEVERLKQELKQKEDSNHC
CDHLNEVESLKEELRRKDYELSILRKAITIVKKDSKKRKGKKRH
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagatcgctacagcagagaagaaggtgcttgttgagatggtgcggttgacc
caaaagcgaggaatgacaggtagtgaaggagactggaaggagtttcttaatagtcgtgac
cctaagttcggggctagcatgagcgacccatctaagaggcccaatgatttgttgattgct
tttctcaagacatttgataaagaggaggatttgatgtttttggataaagtattccagtgt
aacgagaagcgcaattttgtgaagcaagtatcgcagataactccagaaaatgaatcaccc
gagcagaagctggttcgacttacacttgaacaccctcagtacccattggaatattcattc
ccgtcatatgataaggaatgggttgttacaaaattcagccaaaagtctaaagggccgaat
tcaaatttgatctatgccatcgactgtgagatggttctctgtgaagatggaactgagaac
ttggtgagggtttgcatggtggatcgtgacttacaagtgaaaattgatgaacttgtgaaa
cctagaaaagctattaaggactatagaactgatataactggaatttctcctggggatttg
gatggagtttcttgttctttggctgatgtacagaaatccattacaaaattcctttcacat
ggaagaactattttggtaggccacagtctgaacaatgatctgcaagcactgaaattagat
cactcgagggtgattgacacttcatttatcttcaagtattccaatggttctatctataga
aggccttctttgagtaagctgtgtaagtctgtcttgggctatgaccttcggaaggagggt
gctcctcataattgtctggatgatgctcaggctgccatgaaacttgttcttgcgaaactg
gagagcaaagctgatgatggaattgctatagttgatgaggatacacctcaagttggtatg
gagaagctactacttcatcgcataccgattaatgtaccaagtgaagcattggctaaggct
attcatggtgactttaccattgaacttaagccacctaagaaaggtcaagggggggatata
tactctgcacttgccattttccagaatcccaaggaggcactgcaagcatttgaagaggtt
gaaggtaacgcatatgaggactcatctggacgacctcaaaagctcatcagatttcaacat
tcaggatccattgtcagtatctatgttcggaaaatgggacaaaaggactttatggacaac
ttctcatctaagaagagagatctggaggtgattgaaaacatagtcatgtccaaaaagcag
aagactgcaaataaaatggaaattgagacaatttcaaactcgagtagatgctgcaaccat
gtggaggaggttgaaagattgaagcaagaattgaaacaaaaggaggactcgaatcactgt
tgtgatcacttgaatgaggttgagagcctgaaggaagaattgagaaggaaggattatgaa
cttagtatcctgcgtaaagctatcaccattgtgaagaaggatagcaaaaagagaaaagga
aagaaaaggcactag
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