KEGG   Cucumis sativus (cucumber): 101213130
Entry
101213130         CDS       T02486                                 
Name
(RefSeq) protein PAT1 homolog 2
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101213130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101213130
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101213130
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     101213130
SSDB
Other DBs
NCBI-GeneID: 101213130
NCBI-ProteinID: XP_004147742
UniProt: A0A0A0KVF1
LinkDB
Position
4:5071377..5081133
AA seq 808 aa
MEQSDVNDLRDSAENSSANSLFDASRYEFFGQNVVGEVELGGLEEDEDAPLFGSTDEEYR
LFVREESAGLGSLSEMDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSATDWAQD
GDFCNWLEQHVFDPECAQEEKKWSSQPQSSVRLPDPKPLYRTSSYPQQQPTQHHFSSEPI
IVPKSSFTSFPPPGSRSQHGSPRHLKSIQSLADGSQLPFSAPNITSLSKSNLQLAGMHHG
LHYGGNMHQYTTPGLSFSSRPQNQWINNAGLLHGDHSNLFNSILQQQLSHQNGLLSPQLL
SAHQQLQQHRLHHPVQPSLAHFAALQSQLYNAHSPSSHRAMLGLSDVREQKPKSQRGKHN
MRSSQQGSETGSQKSDSGSIQFRSKHMTADEIESILKMQHAATHSNDPYIDDYYHQARVA
KKATGSRLKNAFCPSRLRELPSRSRSGSDQHSHSTPDSLGKIPLASIRRPRPLLEVDPPL
SGSCDGGSEQTISERPLEQEPMLAARITIEDGLCLLLDIDDIDRLLQHNKPQDGGVQLRR
RRQMLLEGLAASLQLVDPLGKSSHGVGPSPKDDIVFLRLVSLPKGRKLLSKFLKLLFPGS
ELARIVCMAIFRHLRFLFGGLPSDPGAAETTSNLSKTVSTCVNGMDLRALSACLVAVVCS
SEQPPLRPLGSSAGDGASIVLKSILERATELLTDPHAASNCSMPNRALWQASFDEFFSLL
TKYCVSKYETIVQSLFSQTPSSTDVIGSEAARAISREMPVELLRASLPHTNEPQRKLLMD
FAQRSMPVSGFSAHGGSSGQMSSESVRG
NT seq 2427 nt   +upstreamnt  +downstreamnt
atggaacaatctgatgtcaacgatttgagggactctgcggagaattcctctgccaattcg
ctctttgatgcttcacgatatgagttttttggtcaaaatgtcgtgggagaagtggagctg
ggtggtttagaagaagatgaagatgcccctttatttggatctacagatgaagagtatcgt
ttgtttgttcgggaagagagtgcagggttgggatctttatcggaaatggatgatttggca
agtacttttgcaaagttgaacaaagttgttactggaccaagacatccaggagtcattgga
gatcgaggatctggttctttttctcgagaaagttcatctgcaactgattgggcacaagat
ggagacttttgtaattggttagagcagcatgtatttgatccagaatgtgctcaggaggag
aagaaatggtcatcccaacctcaatcttctgttcgtcttccagatccgaaacctttgtat
agaacatcctcttaccctcagcagcaacctacacaacatcacttttctagcgaaccaatt
atagtaccaaaatcttctttcacatcctttcctcctccaggaagtaggtcccaacatggt
tcacctcgtcacctaaaaagtattcaatctcttgcggatggaagtcagttacccttctct
gcaccaaatatcacttctttatccaagtctaatttgcagttagctggtatgcatcatggc
ttgcattatgggggcaacatgcaccagtacaccactcccggcctttcttttagtagcagg
ccacaaaatcagtggattaacaacgctggtctattacatggggaccactcaaatctcttt
aacagtatattgcaacagcaactatctcatcaaaatggccttctgtcccctcagttactg
tcagctcatcagcagctgcaacaacacaggctgcaccatccagttcaaccttctttggcg
cattttgcagctcttcagtctcagctttataatgcccattcaccatcctcacacagagca
atgcttggattgtctgatgtgagggagcagaaacccaagtcccagagagggaagcataac
atgcgttcttctcagcaaggttctgaaaccggtagtcaaaagagtgatagtggatccatt
cagttcagatctaagcatatgacagctgatgagattgagagtatcctgaagatgcagcat
gctgcaacccacagcaatgatccatacatagacgactactatcaccaggctcgtgttgcc
aaaaaagctactggttcaagattgaaaaatgcattttgtccgtctcgattgagagaactt
ccatctcgatctcgtagtggttcagatcagcattctcattccacacctgattcattggga
aaaatacccctcgcttctattcgtagaccccggcctctgcttgaagttgatcctccactg
tcaggttcatgtgatggtggttctgaacagacaatatctgagaggcctctggagcaggaa
ccaatgcttgctgctagaatcaccattgaagatggtctctgtcttctccttgatatagat
gatattgataggcttttgcaacataataaaccacaagatggtggagtccagcttagacga
aggcggcagatgctgctagaaggtttggcagcatcgcttcagcttgttgacccacttgga
aaaagtagccatggtgttggcccatctccaaaagatgatatcgtgttcttgcgtttggtt
tctcttcccaaaggtcgaaaacttctttctaaatttctgaagctgcttttccctggtagc
gagcttgcacgaattgtctgtatggctatttttcgtcacttaaggttcttgtttggtgga
cttccatctgatcctggagcagctgaaacaacatctaatctttccaagactgtttctact
tgtgttaatggtatggaccttcgtgcactaagtgcttgtcttgttgctgttgtctgttcc
tcagagcagccaccactgcgcccccttggaagttctgctggagatggggcctctattgtt
ctgaagtccattcttgaaagagctaccgaactattaaccgatcctcatgctgctagtaac
tgtagcatgcctaaccgtgcactctggcaggcatcctttgatgaattcttcagtcttctt
acgaagtactgtgtgagtaaatatgagactatagtgcagtcattattttcgcagacacca
tcgagcaccgatgttatagggtcagaggcagccagagccattagccgtgaaatgcctgtg
gagcttcttcgtgctagtcttccccacacaaatgaaccccagaggaagcttttaatggat
ttcgctcagcgttccatgccagtttctggattcagtgcccatggtggaagtagtgggcaa
atgagttcagaatcagttaggggttag

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