Cucumis sativus (cucumber): 101213206
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Entry
101213206 CDS
T02486
Name
(RefSeq) protein argonaute PNH1 isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101213206
03036 Chromosome and associated proteins [BR:
csv03036
]
101213206
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101213206
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101213206
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101213206
microRNA pathway
RISC loading complex
101213206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Piwi_N
Motif
Other DBs
NCBI-GeneID:
101213206
NCBI-ProteinID:
XP_004146290
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All DBs
Position
1:18189028..18197278
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AA seq
926 aa
AA seq
DB search
MPYMQMEPEDKYVIPASQMALKSHHGSNDGEKTSLWKRKGRRRAKGLPMEGLKQKELDPN
LEFPSSSCKSLTFPRRPNFGQLGTKCLVKANHFLAIIPESDISHYNVKITPEVTSRKMKK
NILTELVKQYRTTELGMRLPVYDGGSNLYTAGLLPFISKEFTVILANEEEGTGTPREREF
KVQIKFVTLASMHQLRELLAGKQVNNPQEALTIIDIVLRELHAQRYISVGRSFYSPCIKK
PQHVGGGLQAWRGFYQSIRPTQMGLSLNIDMSSTAFIEAIPVIDFVAQLLNKDVYSRTLS
DADRIKVKKVLRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVEYFQE
MYGYTIQYTHLPCLQVGNQKKVNYLPMEACKILKGQRYTKGLNEKQITSLLKVSCQRPSD
QEMDILQTVHENAYEADPYAKEFRISIDNKLTSVEARVLPSPWLKFHDTGKEKEHQPQVG
QWNMMNKKVIDGSVIRYWACINFSRNVQESIARGFCQQLVQMCQISGMEFNPDPAIPIYS
ARPDQVKKALKFVYGAVYNKNEGKELDLLIAILPDNNGSLYGDLKRICETELGLISQCCL
TKHVFKKSRQYLANVSLKINVKMGGRNTVLLDALRARIPLVSDIPTIIFGADVTHPESGE
DSLPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPHRGTVAGGMIRELLL
SFKKATGQKPLRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPSYQPPVTFIIVQKRH
HTRLFASNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLW
DENNFSADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYVEPDAQENAKRCC
TRTTNGSCVRPLPALKERVKNVMFYC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgccctacatgcaaatggagccagaagataaatatgtgataccagcttctcaaatggcg
ttgaaatcccaccatggctcaaatgatggtgagaagactagtttatggaaaaggaaagga
aggaggagagcaaaaggacttcccatggaaggattgaagcaaaaggagctcgatccaaat
ctggagtttccctcttcttcttgcaaaagcttaacatttccaagaaggccaaactttggc
cagctggggactaaatgcttggttaaagccaaccacttcctagccataatacctgaatca
gacataagccattataacgttaagataactccagaagttacttctcgtaaaatgaagaag
aatatactgaccgagttggtcaaacaatatagaaccacagagctggggatgcgtctgccg
gtttatgatggaggaagtaacctgtacacagctggattgctgcctttcatatcaaaagag
ttcactgtcattttggctaatgaagaagaggggacaggcacacccagggaacgagaattt
aaagtgcagattaagtttgtaactttggctagcatgcaccagttaagagaattactcgct
ggcaaacaagttaataaccctcaagaagctttgaccattattgacatcgtcttgagggag
ctccatgctcaaagatatatatcagttggacgatccttttactctccttgtattaagaag
cctcagcatgttgggggtggtctgcaagcatggcgaggcttctatcaaagcatccggcct
actcaaatgggattgtctctaaatattgacatgtcatccactgcattcattgaagcaatc
ccggtcattgattttgtcgctcaactcttaaacaaagacgtgtactctagaacattgtct
gatgctgatcgtatcaaggtcaaaaaagtacttagaggtgtaaaagttgaagttacacat
agaggaaacgtacgaaggaaatatcggatttcagggctaacatcacagcctacaagagag
ctaattttccctcttgatgagcagatgaacatgaaatctgtagttgagtacttccaagag
atgtatgggtataccattcagtatacacatttgccttgccttcaagtaggaaaccagaag
aaggtgaattatctacccatggaggcatgtaagatactcaaaggacagagatacacaaaa
ggacttaacgaaaagcaaataacttccttgttgaaggtttcatgccaaagaccctctgat
caggaaatggacattttacagactgttcatgagaatgcatatgaggcagatccatacgca
aaagaatttcgaatcagcattgacaacaagcttacatcagttgaagcacgagtccttcca
tctccatggctaaaatttcatgatactggaaaagaaaaggaacatcagcctcaagttggt
cagtggaatatgatgaataagaaagttatagatggaagtgttataagatactgggcttgt
ataaatttctcacgtaacgttcaagagagcatagctcgtggtttctgtcaacagctggtc
cagatgtgccagatctctggcatggaatttaacccagatcctgcaattcctatatactca
gcaagaccagatcaagtgaagaaggccttaaaatttgtatatggtgcggtttataacaaa
aatgaagggaaagagttagatttgctgatagctattcttcctgacaacaatggctcatta
tatggtgatcttaaaaggatctgtgaaacagaattgggattgatatcccagtgttgtcta
acaaaacatgtcttcaagaagagcagacagtacttggcgaacgtgtctcttaagatcaat
gtcaagatgggtggaagaaacactgttcttttagatgctttacgggcaagaattcctcta
gtcagtgacataccaaccattatttttggagctgacgtcacacatccagaatctggagag
gattctcttccatcaatagcagctgttgtggcttcccaagattggccagaagttacaaaa
tatgctggattggtatgtgcgcagccgcacagggaggaactaattcaagatttattcaaa
acgtggaaggatcctcatcggggaacagttgccgggggtatgataagggagctcttgctt
tcatttaagaaggccactggacaaaaaccattaaggataatattctatagggatggggtc
agtgagggtcagttctaccaggttctactgcacgaactcgatgccatacgcaaggcctgt
gcttcactagaacccagttaccaacctccagtaacttttatcatagtccaaaagcgacac
cacaccagactctttgcatccaatcacaacgataggagtagcactgacaagagtggtaac
attttaccaggtactgtcgtggattcaaaaatatgtcatccaactgagttcgacttttat
ctatgcagtcacgcaggaatccagggaacaagtcgtcctgcacattatcacgttctttgg
gatgagaacaatttcagtgcggatgaaattcaatctctgactaataatctctgttacacg
tatgctcggtgcacaagatcggtctcagtagtgcctccagcatactacgctcatttagca
gcatacagagctcgattctacgtagaacccgacgcacaggagaatgccaaaagatgctgc
actcgaaccacaaatgggtcctgtgtccggcctctgcctgcgctgaaagagagagtgaaa
aatgtaatgttctattgctga
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