Cucumis sativus (cucumber): 101213308
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Entry
101213308 CDS
T02486
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
csv03015
mRNA surveillance pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101213308
09122 Translation
03013 Nucleocytoplasmic transport
101213308
03015 mRNA surveillance pathway
101213308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101213308
03041 Spliceosome [BR:
csv03041
]
101213308
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101213308
Spliceosome [BR:
csv03041
]
Complex C
Other components
EJC/TREX
101213308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP
Motif
Other DBs
NCBI-GeneID:
101213308
NCBI-ProteinID:
XP_011654337
UniProt:
A0A0A0KUK7
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All DBs
Position
4:3118987..3124973
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AA seq
710 aa
AA seq
DB search
MSSKSKYSILDNRPIDQWKVTELKEELKRRKLTIKGLKEDLVKRLDEAVRMEREENAEET
NGVDGDPPVTNSDNNQEHASIVSGTAKETNEDTNITDNVDDVGVQVEKDDSNAAVKEGGI
QDGAGLNGSPRVEEGSSVRVSTVETKTTVTETVVSEVAIGVGVEGLQNTESKDNEDRLEL
DSEDSKPQLDSEESKPHMVSEESKPQLVSEGSKPQLDSEDSKPLLDDVNMELQVENEYLK
SQQADLVHDSSAPDDQVSEVSPVLGSQVRTDSISTASVTINEMIELKENMSADHVKLELD
VKQEMVEPSSSIIVPDAGESHPMDVEEPHVNKNVQESLANRDVLESPENKDVMDSIVKED
VEKKEDVKDIISELHEKHDGVDVGFSEKLNLDRSSGDDSIEDTTENKTDSVNNLEEMGEK
NVKNEGLMSQEEKVVDIAMRGSTGDRKSIGIENDVTSLPAEKRRLHDQAVVGNESVKRQR
RWNSENLKIPEPQNAAHHTSTSNSKDIHQSTAPKRNFSRSDSTASEDPSKERVVPPSPKP
PTNSLRIDRFLRPFTLKAVQELLGKTGNVTSFWMDHIKTHCYVTYSSVEEALKTRDAVYN
LQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTPAVVAPPVSNVPPPVQPEPSPRQPRQQH
APPPSLPPPRPHPHPHPHPHPQTTLLKQGSSYHSHLHLHFPIKSTLLLSP
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaaatcgaaatattcaattctcgacaatcgaccgattgatcagtggaaggtt
acggagttgaaagaggaacttaagagaaggaaattgaccatcaaggggttgaaggaagat
ttggttaaacggttagatgaagcagttcgaatggaaagggaagaaaatgctgaggaaacc
aatggtgttgatggtgaccctccagttacaaatagtgacaataaccaagagcatgcatct
attgtttctggaacggcgaaagaaactaatgaagatactaacatcacagataatgtagat
gatgttggagttcaggttgaaaaggatgatagtaatgcagctgtgaaggaaggtggaatt
caagatggggctggtcttaatggttcccccagggtagaagagggatcgtccgtccgtgtt
tctactgtggaaactaaaactactgtaactgaaaccgtagtatctgaagtagcaataggt
gtgggtgtggaaggtttgcagaacactgaaagcaaggataacgaggataggctcgagctg
gatagtgaggattcaaagccccagctggatagtgaggaatcaaagccccacatggttagt
gaggagtcaaagcctcaactggttagtgagggttcaaagccacagcttgatagtgaggat
tcaaagcccctgcttgatgatgtgaatatggagctccaggtggagaatgagtatttgaag
tctcaacaggcagatctcgtgcacgactcttctgctccagacgaccaggtatctgaggtc
agccctgttttagggtctcaagtaagaactgattctatttctactgcttctgtgacaatt
aatgaaatgattgaactaaaggaaaatatgtctgctgatcatgtaaaattagaactagat
gttaagcaggagatggtggaaccatcatccagcattattgtcccagatgctggcgaatca
catcctatggatgttgaagagccacatgtgaacaagaatgttcaagagtcacttgcaaac
agagatgttctggagtcacctgagaacaaagatgttatggactctattgtgaaagaagat
gttgagaagaaagaagatgttaaggacataatttctgagcttcatgagaagcatgatggt
gtagatgtggggttctctgaaaagcttaatttagatagaagttctggggatgattcaata
gaagatacaacagagaataagactgattcagtgaataatcttgaagaaatgggagagaag
aatgtaaaaaatgagggccttatgtcccaagaggaaaaggttgttgacatagcaatgcga
ggctcaactggagacagaaagagtattggtatagagaatgacgttacatctttgcctgct
gaaaaaagaaggcttcatgatcaagcagtggttggaaatgagtccgtgaagagacagcgt
aggtggaattctgagaacctcaaaattccagagccccaaaatgctgctcatcatacatcg
actagtaattcaaaggacattcatcaatccactgctccaaaacgcaacttctccagatct
gactccacagctagtgaagatccatcaaaggaacgtgttgttccaccatcaccaaaacct
cccacaaactcactaagaattgatcgttttctgcgtccatttaccctcaaagctgtgcaa
gaacttctgggtaagactggcaatgttaccagtttctggatggatcacatcaagacgcat
tgctatgtaacttactcgtcggtggaagaagccctgaagactagagatgctgtttacaac
cttcaatggccaccaaatggtgggcgtcttcttatagctgagtttgttgatcctcaagaa
gtaaaaactcgagtagaagctccacagactcctacacctgcggtggttgctccaccagtc
tctaacgtgcccccacccgtgcaacccgagccttcgcctcgtcaaccaaggcagcaacat
gctccgccgccttctcttccaccaccccgcccacacccacacccacacccacacccacac
ccacaaacaacgttgctcaagcaagggagcagctaccactcccacctccacctgcacttc
ccgataaagtcgacactcctattgtcaccttag
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