Cucumis sativus (cucumber): 101213649
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Entry
101213649 CDS
T02486
Name
(RefSeq) cryptochrome-1 isoform X2
KO
K12118
cryptochrome 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101213649
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
ATPD_C_metazoa
Motif
Other DBs
NCBI-GeneID:
101213649
NCBI-ProteinID:
XP_004136290
UniProt:
A0A0A0LDY1
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Position
3:38763818..38768646
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AA seq
681 aa
AA seq
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MSGGGCSIVWFRRDLRIEDNPALTAAVRAGAVVVVFIWAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLRSLGTYLLTKRSTNTISALLDVFKATGASHLFFNHLYDPLSLIRDHRVKEVLS
AQGIRVRSYNADLLYEPWDVKDANGNPFTTFAGFWERCLSMPCDPEAPLLPPKRIISGDA
SRCPCDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSREFDRIDNPQLEGYKFD
PNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGLDAAKARLEEA
LSEMWQQEAASRAAIENGTEEGLGDSSESIPIAFPQDIAMDEEDIEPARMNAHTVRCYED
QMVPSMTSSVRLEDESSLNIQSTAEDGRAEVPTNANLPQEPARDAVNPRAMPTAPTQTRR
PYTAGIALRTSVEDSTAESSSSSDVRRERDGGVVPVWSPPSSSYTEQFVVDENGIGTSSS
FLQGHQQTHQIINWRRLSQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggcggttgtagcatagtttggttcagaagagatctcaggattgaagataac
ccagctcttaccgccgccgtcagggccggtgccgtcgtcgtcgtcttcatctgggctcct
gaagaagagggtcactattatcccggtagagtttcccgatggtggctcaaacaaagctta
gctcatcttgattcctctcttagaagccttggtacttatcttctcactaagagatccacc
aacaccatttctgctttgcttgacgtctttaaagccaccggtgcttctcacctcttcttc
aatcacttatacgatcctttgtcgctcattcgggatcatcgagtgaaggaggttttatct
gcccaagggatacgtgtgaggtcttacaatgcagatttactgtacgaaccgtgggatgtt
aaggatgccaatggcaatccgtttactacctttgctggtttctgggagagatgtcttagt
atgccttgtgatccagaggcaccactactaccacctaagagaataatttcaggtgatgca
tccaggtgtccatgtgatacgctggtatttgaagatgaatcagagaagggaagtaatgcg
cttctcgctcgagcatggtctcctggatggagcaacgcagataaagctttgaccacattc
atcaatggaccattacttgaatactcaaaaaatcgtaggaaggcagatagtgcaaccacc
tcatttctgtctccccacttgcatttcggagaggtaagtgtgagaaaagtattccatctt
gttcgaatgaaacaggttttatgggccaatgaaggaaacaaagctggcgaagagagtgtc
aacttgtttctcaagtctattgggcttagagaatattccagatacatgagtttcaaccat
ccgtacagtcatgaaagacctcttcttgggcatcttaaattcttcccctgggttgtggat
gaaggctattttaaggcatggaggcaaggaaggactggttatccattagtggatgctggt
atgagggaattatgggctacgggatggctgcatgaccggatccgagttgtcgtttctagt
ttctttgtgaaggttctgcagcttccctggagatggggaatgaaatatttctgggatact
ctcttggatgcagatctagagagtgatgcgcttgggtggcagtacatatctggaacactt
cccgatagtcgcgaatttgatcgcattgacaatccacagctggagggttataaattcgac
ccaaatggagaatatgtccggagatggcttcctgaactttctagattacccactgaatgg
attcatcacccatggaatgcaccagaatctgtgctccaagctgctggggttgagcttgga
tcaaactaccctcttcccatcgtaggactggatgcggccaaagctaggttggaagaagcg
ctgtcggagatgtggcaacaagaagcggcttcaagggctgccatagagaatggaactgaa
gagggactcggggactcttctgaatcgatcccaattgcatttcctcaagacattgcaatg
gatgaggaagacattgagcctgcaaggatgaacgctcatacagttcggtgctacgaggat
cagatggtcccaagcatgactagttcggtgagattagaagatgaatcttctttgaacatt
caaagtacagcagaagatggtagagcagaagtacctacaaatgcaaatctaccccaagag
ccggccagagatgcagttaacccaagagctatgccaactgctccgacacagactcgacgc
ccctataccgcaggtatagccctaagaacttctgttgaagactccactgcagagtcttct
tccagtagtgatgttagaagagagagagatggaggtgtagttccggtttggtctccacca
agttcgagttacacggagcagtttgtggttgatgaaaatggcatcggaactagctcttcg
ttcttgcaggggcatcaacagactcatcaaataatcaattggaggcggctatctcagact
gggtaa
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