Cucumis sativus (cucumber): 101213750
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Entry
101213750 CDS
T02486
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101213750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101213750
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
101213750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
101213750
NCBI-ProteinID:
XP_004140765
UniProt:
A0A0A0L9V7
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All DBs
Position
3:13016352..13019854
Genome browser
AA seq
309 aa
AA seq
DB search
MRPPRGRGGGGGFRGRGDGGRGGRGRGGGGGRGGGGGRGMSSRGGGRGGGGGRGRGGGRG
GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV
WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS
GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
KKQKAAAAS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctcgaggccgcggcggtggtggtgggtttaggggcagaggtgatggagga
aggggaggcagaggcagaggtggcggtggaggtagaggcggcggtggtggtagaggtatg
tcaagccgtggtggtggtcgtggaggtggaggtggaagaggtcgtggtggaggtagagga
gggggtatgaaaggtggaagcaaagttgttgttgaacctcatagacatgagggtattttc
atagctaagggtaaagaagatgctcttgtcacgaagaatatggtaactggagaatctgtc
tacaacgagaagagggtatccgtacagaatgaagatggaacaaaaattgagtacagagtt
tggaacccatttaggtctaagttggctgctgctgttcttggtggtgttgatgacatatgg
attaaacctggtgctcgagtgttgtatcttggtgctgcttcaggaacaacagtatctcac
gtctcagatgttgttggcccttccggtatagtgtatgctgttgaattctcccatagaagt
ggtagagatttggtcaacatggcaaagaagcgcactaatgttatacctattattgaagat
gctagacacccagctaagtaccgaatgttggttggtatggtggatgtgatattttcagat
gttgctcagccagatcaggcaagaatcttagcacttaatgcgtcatactttctcaaagcc
ggtggccattttgttatatctatcaaggccaactgcattgactcgacagttcctgcagag
gctgtgtttgcaagtgaagttaataagctcaaagcagatcagttcaaaccgactgagcag
gtgaccctcgaaccattcgagcgagatcatgcttgtgttgttggtatctatagggcgcca
aagaaacagaaggctgctgcagcttcttag
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