Cucumis sativus (cucumber): 101213870
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Entry
101213870 CDS
T02486
Name
(RefSeq) LOW QUALITY PROTEIN: tRNase Z TRZ1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csv03016
]
101213870
Enzymes [BR:
csv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
101213870
Transfer RNA biogenesis [BR:
csv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
101213870
Prokaryotic type
101213870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
PRTase-CE
Motif
Other DBs
NCBI-GeneID:
101213870
NCBI-ProteinID:
XP_011653493
LinkDB
All DBs
Position
4:complement(13300902..13325437)
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AA seq
297 aa
AA seq
DB search
MAAGTASFSSKNLDSNPMEMSKGIQIEGYPIKGLSIGGHETCIIFPTLNLAFDIGRCPQK
AISQDSFFISHGHMDHIGGLPLYVATRGLYKMGPPTIIVPKSIKNDVENLLEVHRRLDQS
ELRCNLIGLEVGEELSLRRDLKVRVFRTYHVIDSQGYLLYSVKQKLKKDYLGLSGNEIKK
LRLSGVEITYTITEPEVAFTGDTTXDFIVDENNIDVLRAKILVMESTFLENRVKVEHARE
YGHTHLFEIINHAKKFKNKAILLIHFSARYTTEEIQEAISTLPPPLAGRVSALTEGF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcagccggaactgccagctttagcagcaaaaacttggactcgaacccgatggaaatg
agtaagggaatacaaattgaaggatacccgattaagggcttgtccattggaggccatgaa
acttgcatcattttcccaacactcaatttggcctttgatattggtcgctgccctcaaaag
gccataagtcaggactccttcttcatctcccatggtcacatggatcacattgggggactt
cccttgtacgttgctacccgtggattatacaaaatgggaccaccaacaattattgtacca
aaatctataaagaatgatgtagaaaaccttttagaggtgcacagaagattggatcaatct
gagctgagatgtaatttgattggcttggaagtgggggaagagttgtcattgagaagggac
ctcaaagtgagggtgtttaggacataccatgtcattgacagccagggttatctgctttac
tctgtaaagcaaaagcttaagaaagattacctgggactatctggcaatgagatcaagaaa
ctccgcttatctggtgtagagattacttacacaattaccgagcctgaagtggcttttaca
ggagataccacgntcgactttatagttgatgaaaataatattgacgtattgagggcaaag
atcctagttatggagagcacatttcttgaaaatagagttaaagtggagcatgctagagaa
tatggacacactcacttatttgagataataaatcatgcgaaaaagtttaagaacaaagcg
attcttctgattcacttttcagcacgctacactacagaggaaattcaggaagctatatct
actttacctccacctttggcaggccgagtttctgcactaaccgaaggtttttga
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