Cucumis sativus (cucumber): 101213921
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Entry
101213921 CDS
T02486
Name
(RefSeq) RNA pseudouridine synthase 2, chloroplastic
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101213921
Enzymes [BR:
csv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
101213921
Ribosome biogenesis [BR:
csv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
101213921
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
101213921
NCBI-ProteinID:
XP_031736623
LinkDB
All DBs
Position
2:16912999..16917908
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AA seq
446 aa
AA seq
DB search
MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIAN
YAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKA
GDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILN
HCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKD
EHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMS
LLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLR
EIGTQKEMLRLPNNSILKLRWSSMQQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgtttgctccgctagaacaattcaagcttcaccttctcctattcacttcttt
ttccctccaaatcgtagaagaatcggttcgaatgttcttcgaatttcctccaatttctcc
actagatgctcctccgattacgatgaatatagtgaagctcaatccgaacggatagccaat
tacgccggaaccagactggaagagaccgtggacgtcaatcccggtaaagttcgtctcgat
tcttggatttcttgccgcattaacggcatcagtagggctcgagttcagtccagtattaga
gcgggattagtttcagttaatggccgagttatcgataaggtttctcacaatgtaaaagct
ggggatgtgatcaattgtaccatatccgagttgcaaccattgagagctgaacctgaagat
attgatttggatatagtttatgaagatgaacatgttttagtcgtaaacaaacctgctcac
atggttgttcatccagcacctggaaatgcgacaggaacactagtaaatgccattcttaac
cactgcagtctcccgatggttgcaacatcaactggggaaaatgagtcggattcagatgtt
tccgatgatgagttcagttcaattggagttttttctagagtttctgaggcgcctattcgt
cctggtattgtgcataggttagataaaggaactagtggattgcttgttgttgccaaggat
gaacattcccatgctcacttatctgctcaatttaagcaacattctattgagagagtttat
attagtctcacatgtggagttccaccttcaactgctgggcgtattgagatgccaatttgc
cgtgatccaaacaatcgtatccgcatgactgcaatagatggaacaaaaaacaatccacat
gcaaagtacgctgctagtagatacaatgttatggaaattttagcccaaggaggttcttca
ttggttgagtggagattagaaacaggccgcacacatcagatacgtgcacacgcgaagtat
atgggaataccattacttggagacgaggtctatggaggtaccaagagcatggccatgtcg
ctgcttcgaactagagcatcatctaattgtcacggccagctcatgcagcttgtttcttca
ttagagaggccctgtcttcatgctctgactcttgggtttgtacatcctcacacagggaag
aacatacgtttttcatgcccacccccaacagattttactgaaattttgagtcagcttcgc
gaaattggcacacaaaaggaaatgctccgattgcccaataactcgatattgaaattgaga
tggagcagcatgcaacaatag
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