Cucumis sativus (cucumber): 101214018
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Entry
101214018 CDS
T02486
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101214018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101214018
03036 Chromosome and associated proteins [BR:
csv03036
]
101214018
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101214018
Coactivators
SAGA/TFTC/STAGA complex
101214018
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101214018
STAGA complex
101214018
TFTC complex
101214018
SAGA complex
101214018
SLIK complex
101214018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_VPS8
ASA1
Beta-prop_WDR41
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_NOL10_N
PAC11
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Tricorn_2nd
LisH
Dimer_MINDY4_N
PALB2_WD40
LisH_SSDP
WD_LRWD1
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
101214018
NCBI-ProteinID:
XP_004145505
UniProt:
A0A0A0L139
LinkDB
All DBs
Position
4
Genome browser
AA seq
674 aa
AA seq
DB search
MDEELIANFVSAYLKKKGFKETEQAFQEELRQNKTNSSSPSSFIDVDVAKHLLSFSEAEN
IPAKYLEGYSKLRSWAYNSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARTFFNRFRE
DHEMMHLRDIQKLEGVLSPSHLEEMEFAHSLRQGKVNIKICQYSYEMLLQYLHKTQTTVI
LGIINERINFQVFPGQPSSISDDAELVTLTGSTQDTANQINKKEVHWGLLEDSLEERLEK
AAGLLSDSEKAEGETKDGDVDENKKRTAEGGKQGGSIKKVKKDKTASATGKTLRAEANSA
SMAPRVKPELALPIISTEVEESILEDLRNRVQLSSVALPSVSFYTFINTHNGLNCSSISY
DGALVAGGFSDSSLKVWDMAKLGQQAGNTVLQDENDMSTSDPVTGHTSGKRPYTLFQGHS
GPVHSATFSPIGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASC
SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVR
IFIGHRSMILSLAMSPDGRFMASGDEDGTIMMWDLSTGRCVTPLIGHTSCVWTLAFSCEG
SLLASGSADCTVKLWDVTSSTKPPRTDENKTGTPNRLRSLKTLPTKSTPVYSLRFSRRNL
LFAAGALSKNASTA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaactgattgcgaattttgtgtcagcatacttgaagaagaagggtttcaag
gaaacggaacaagcttttcaggaagagctacgtcagaacaagactaattcttcttctccg
tcttctttcattgacgtcgacgttgctaagcacttactctccttctccgaagcagagaat
attccagctaaataccttgaaggatatagcaagcttaggtcgtgggcttataactcacta
gatttgtacaagcatgagttgcttcgtgtgctataccctgtgtttatacattgtttcatg
gatcttgtggctaaaggacatattcaagaagctcgaacctttttcaataggttccgtgaa
gaccatgaaatgatgcacctacgagatatacaaaagttggaaggtgtactatctccctct
catttggaggagatggaatttgctcattctcttaggcagggaaaagtcaacataaaaata
tgccagtactcctatgagatgctactgcaatatcttcataagacccaaaccacagtgata
cttgggattatcaatgaacgcatcaacttccaagttttccctggtcagcctagctcaata
tctgatgatgcggaacttgtgacactcacgggaagcacccaggacactgctaatcagata
aataaaaaagaagttcattgggggttacttgaagattctttagaagaacgcttggagaaa
gctgctggtttgctttcagattctgaaaaagctgagggagaaaccaaggatggtgatgta
gatgagaataagaaaagaacagctgagggaggaaagcaaggcggttcaattaaaaaagtc
aagaaggacaagactgccagtgcaactgggaaaactctgagggctgaagctaattcagca
tctatggcaccacgagtgaagccagagcttgctttacccataatatcaacagaggtggaa
gaatctattcttgaggatttgaggaaccgtgtgcagttgagttctgtagctctgccatca
gtcagcttttataccttcattaatacacacaacggtttaaactgttcatcaatatcgtat
gatggagctttagttgccggtggattctcagactcttctttgaaggtttgggacatggca
aagctaggacaacaagctggcaatactgttttgcaggatgaaaacgatatgtctactagt
gatccagtgacagggcatacgagtgggaagaggccttatacattatttcaaggtcattct
gggcctgttcactctgcaactttcagtcccataggggacttcgttctttcatcctctgca
gacacaactattcgattgtggagcacaaaactaaatgccaatcttgtttgctacaaaggt
cacaattacccagtatgggatgttcagtttagtccggttggacattattttgctagttgc
tcacatgatcgaactgcaaggatttggtctatggatagaattcaacctttaaggatcatg
gcaggacatctatctgatgtggattgtgttcaatggcatgccaactgcaactacattgca
actggctcgagtgacaaaactgttagattgtgggatgtccagagtggggaatgtgttcga
attttcattggtcacaggagcatgattttgtcgttggcaatgtcacctgacggtcggttc
atggcatctggtgatgaagacggtacgattatgatgtgggacctatcaacgggtcgctgt
gttacacctttgattggacacacatcatgcgtttggacgcttgctttcagttgtgagggg
tctctcctcgcctccggttccgccgactgcacagtgaaattatgggacgtaacttcaagc
accaagccaccaagaacagatgaaaacaaaactggaactcccaatagacttagatccttg
aagactctaccaaccaagtcgactccggtttacagtttgcggttctctcggaggaatctc
ttatttgcagctggggctctctcaaaaaatgcatcaactgcttaa
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