Cucumis sativus (cucumber): 101214428
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Entry
101214428 CDS
T02486
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101214428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csv04040
]
101214428
Ion channels [BR:
csv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101214428
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Motif
Pfam:
cNMP_binding
T4SS_pilin
Motif
Other DBs
NCBI-GeneID:
101214428
NCBI-ProteinID:
XP_011651603
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Position
3:complement(24492616..24497181)
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AA seq
541 aa
AA seq
DB search
MANANNITSRTSSEDQEHTKFVLRFGFLISSIIAVCLDVLFFYIYYIDDQRKCFAVDKKI
KNAAIGARTVTDFILLLEVAYKVYSSSILELCPNSKTNVAPLTFFGRLADVSKRVPWMSV
IVDFLALLPLPQIILVVVFTSRKSIKYLKNSWRLIFLPLFQFVPRIIRIYVLCKKLSRSA
APNDITGTGQFRGTFNFILFIFASHVLGAFWYCFAVLRELYCWQNACKFDSGCRVNSFFC
EDITGNDWFVDKFCPINPPNPAIFDFGLFLSAHQSGISRINGFNKKLLYCFSWGLRTLSS
FGSNLTTSSYVWENFFAALVTISGILLVVYLIGNLQVYLQSSTLRSEEKRRTMQKKDAEI
DLWIDYYKFQKKKEIKEFVREKFEWKNDVNLITLLDVFPSPFAEEIKKELCWDILKRVPM
LKEFEEEKLEEMMKDMKPIIFAEQSYIIREGEPIEHMLLFTKGMALTFSKRTRTRTTINT
LGKGDLFGEQLLNWAAGSLPVSEIPLSKCTLKTQTQMEAFALKAIDPQYHTKWDTITYRL
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcaaacaatattacttccaggacaagctcggaagatcaagagcacacaaaa
tttgtactacgatttgggtttctcatttcatctataatagctgtctgcctcgatgttttg
ttcttctacatctactacatagacgatcaaagaaaatgcttcgccgtggacaaaaagata
aagaacgcagccattggggccaggacagtgacggacttcatccttctactcgaagtcgcc
tacaaggtctactcaagttcaatacttgaattatgtcccaattctaaaacgaatgtggct
cctctgactttcttcggacgccttgctgatgttagcaaaagggtaccatggatgagtgtt
attgtcgactttttggctctgcttccccttccacagattatccttgtggtagtctttaca
agtaggaaaagtatcaaatatttaaaaaacagttggcgactcatctttctgcctctcttc
caatttgtcccaagaatcatccgaatctatgtgttatgtaagaagctttccaggagtgct
gctcctaatgacataacaggaaccgggcagttcagaggcacattcaatttcattctcttc
atttttgccagtcatgtgcttggagcattttggtactgcttcgcagttctaagagaactg
tattgctggcaaaatgcctgcaaatttgacagtggatgtagagtgaattcctttttttgt
gaggatatcacgggcaatgactggtttgttgataagttttgccctatcaatccacctaat
ccagcaatattcgattttggtttattccttagcgcccatcaatctggtatctcgaggata
aatggttttaataaaaagctcttatactgcttctcttgggggctacgtacattaagctca
tttgggtcaaacctgactacaagtagctatgtatgggaaaacttcttcgcggctctcgtt
accattagtggaatacttctagttgtttatcttatcggcaacttgcaggtatatctacag
tcctcaactttaagatcagaggagaaacggagaacgatgcaaaaaaaagacgctgaaata
gacttatggatagattattataaattccagaagaagaaggaaatcaaagagtttgtgaga
gaaaagtttgagtggaaaaatgatgtaaatttgataacattgctcgacgtgtttccatcg
ccattcgctgaggagataaagaaagaactttgctgggatatcctaaagagggttccaatg
cttaaagaatttgaagaggagaaattagaagagatgatgaaggatatgaagccaataatt
tttgcagagcagagctacattattcgagaaggggaacctattgagcatatgctattgttc
acgaaaggtatggcactgacatttagtaagagaactagaactagaacaactattaacact
ttaggaaaaggtgatttgtttggggagcaactattgaattgggcagcaggaagtcttcct
gtatctgaaattcctttgtccaaatgtactctcaagacacagacccaaatggaagctttc
gctcttaaggctatcgatccacaataccataccaagtgggacacaattacgtataggtta
agttaa
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