Cucumis sativus (cucumber): 101214706
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Entry
101214706 CDS
T02486
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101214706
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101214706
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
90S particles
Helicases
101214706
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
P-loop_SecA
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
101214706
NCBI-ProteinID:
XP_004137811
UniProt:
A0A0A0LAD5
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Position
3:complement(29821792..29826353)
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AA seq
616 aa
AA seq
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MEKGTSFLFAGIHFDKKRFAADFAKFEGKKESDNVVEGPSSIDNGDLEVHEGSTPSDKRK
RKRKSATAKSVEGFSVFKDSKSTADTSLNEENHLSENDPSEEKKEFYRKLERDALFRKKY
NIHVSGNNVPSPLQNFGELSTRYDCDSYLLHNLVELGFKEPTPIQRQAIPVLLSGRECFA
CAPTGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIRECKKLAKGKKFHIKL
VTKEVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEYLVLDESDKLFELGLIKQI
DAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGS
EEGKLLALRQSFSESLNPPVLIFVQSKERAKELYGELAFENIRVSVIHSDLSQLERENVV
DDFRAGKTWVLIATDVISRGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSGEAITF
YTDEDIPFLRNIANVMSASGCEVPSWITELRKMKWKKHRPKRDSISTKPHEDGDTEPPKK
KSKKHRPKRNSVATKPNQDGDTELQKKKSKKLKPRRDSVSMKSKDDDDAGLKTKKLKKQR
HKRDSVPTKPKDDDEA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggaacttctttcttgttcgccggtattcatttcgacaaaaagaggtttgcg
gcagattttgctaaatttgaggggaaaaaagaaagtgacaatgtagtggagggtccaagt
tccattgataatggtgatttggaagtccatgagggttcaacaccttcggataagaggaag
aggaagaggaaatcagcaaccgcaaaatcggtggagggattcagcgtcttcaaggattca
aaatcaacagcagatacttcgttgaatgaagagaatcatctgtctgaaaacgatccatct
gaagagaagaaggaattttatcggaaactcgagagagatgctcttttccggaagaagtat
aatattcatgtctctgggaacaatgttccatcgccacttcagaattttggagagttgagc
actagatatgactgtgactcatacttactacataatctcgtagaactcggatttaaagag
ccaacaccaattcaaaggcaggctattccagtcctcttatctggccgtgaatgctttgct
tgtgccccgactggttctggaaaaaccttggcgtttgtgtgccctatgcttatgagactc
aaggatccttcgaaggaaggcatccgtgctgttatactttgtccaacacgagaattagca
tctcagacaataagggagtgcaaaaaactggctaaagggaaaaaattccatatcaagttg
gtgacaaaagaagttttaagacatgctgatttctcaaagttctcatgtgatgtactcata
tccacgccacttaggttaaggcttgctattcggaaaaagaaaattgatctcagtagggtg
gaatatcttgttttggatgaatctgataagttatttgagcttggcttgataaaacagatt
gatgctgttgttaaagcatgctcaaatccttcaatagttcgctcattgtttagtgctact
ttacctgattttgttgaggatcttgctcgctctgtaatgcatgatgctgttcgggttatt
gttggcaggaagaacactgcttctgaaactgttaagcaaaaattggtttttgccggaagt
gaagaagggaagcttcttgcacttcgtcaaagcttttcagagagtttgaatccaccagta
ttgatctttgttcaaagcaaggagcgggccaaagaactttatggtgagctagcatttgag
aatatcagagtcagtgttattcattctgacttgtcacagttggagcgagaaaatgttgtt
gatgactttagagctggaaaaacttgggttttaatcgccactgatgtaatttctcgagga
atggatttcaagggggtcaactgtgtaatcaattatgattttccagattctgcggcagca
tacattcatcgaattggtcgttccggcagagcagggaggagtggagaagccattacattt
tatacagatgaggacattccatttctgcgaaatatagccaatgttatgtcagcctcaggt
tgtgaagtcccatcttggatcaccgagcttcggaaaatgaagtggaaaaaacacaggcca
aagagagattcaatctcaaccaaaccacacgaagatggtgacaccgagccaccaaaaaag
aagtcgaaaaaacacaggcctaaaaggaattcagttgcaaccaaaccaaatcaggatggt
gacactgagctacagaaaaagaagtcgaaaaaactcaagcctaggagagattcagtctca
atgaaatcaaaggatgacgatgacgctgggctaaagacaaagaagttgaaaaaacaaagg
cataaaagagactcagtcccaaccaaaccaaaggatgatgatgaagcctaa
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