KEGG   Cucumis sativus (cucumber): 101214788
Entry
101214788         CDS       T02486                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101214788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csv03041]
    101214788
Spliceosome [BR:csv03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101214788
 Complex B
    101214788
 Complex C
   U2 SnRNP specific factors
    101214788
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin MBDa
Other DBs
NCBI-GeneID: 101214788
NCBI-ProteinID: XP_004138633
LinkDB
Position
2:22414630..22418885
AA seq 809 aa
MLGSFGPILTLPAPSEDSKPTVQDVQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP
PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ
SSAQQPSQGADSVAPASAPSGPTADNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
KVLMPPKGLTEKLKKNVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV
EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLEDQNDATNNDARNLPGP
AALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPIPPPQPPVISMIPSVQP
PPPAMPGQQSFFMNRPPSMPPQMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPPMNT
MIPPPPMPQGVPPPPMPQGLMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQHP
GPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPGFL
KDNMSLAYYNVGAGEGLSLSLRERGGRKR
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgcttggctcatttggaccaatcttgactcttccagctccttctgaggattcaaaacct
acggttcaggatgtgcaggatgaaattattaataacaatgaagtggataaagacaacacc
aactctgcacctacatcagttgcaactcatactaaaactattggtatcatacatcctcct
ccagacatcagaagcattgttgataaaacttcacaatttgttgcaaaaaatggaccagaa
tttgagaaaaggattattgcaaataatgctggtaatgtcaagttcaatttcttgaaccct
tcagatccctaccatggttactatcagcataggttgtctgagtttcgtgcccagaatcaa
tcatctgcacagcagccttcacaaggtgcagattccgttgcaccagcatcagccccatct
ggtccaactgctgacaacaatgaaacaatagcagcaaaacctgatgtttctgctttgttc
aaacccgtgcgcaaagtacttgagcccccagaggctgagcagtacactgttcgtcttcct
gaagggattacaggggaagaattggatattatcaagctcacagcccaatttgttgctcga
aatgggaaatcattcttgacaggattgacgagtagagagattaacaatcctcaatttcat
tttctgaaacctacgcatagtatgttcatgttttttacctccctagcggatgcatattct
aaagtgttgatgccccccaaggggttgactgagaagttgaagaagaatgttactgacatg
acaacagtgcttgagagatgtgtgcatagacttgaatgggaacgttcacaagagcaggca
aggcaaaaagccgaagatgagattgagcaggaaaggatacaaatggctatgattgattgg
catgattttgttgtagttgaggcaatagactttgcagatgacgaggatgaagatttgcct
ccaccaatgactcttgaggaggtaattagaagaagcaagatttctgtcgctgaggaagag
attgttgagcctgggaaggagatggaaatggatatggatgaagaagagatgcaacttgtt
gaagagggtatgcgggctgctaggttaggagaaaacgacaatgacaagaatgatatgaag
gtagatgaggagccagagccaccaatgaggatcgttaagaactggaagagacctgaagag
agagttcctgcagaaagagatcatacaaaatttgttgtttctccaatcacaggtgaacta
attccaattaatgagatgtctgaacatatgaggatttcacttattgatccgaagtacaaa
gagcaaaaggaaagaatgtttgccaagatacgggagactactcttgctcaggatgatgag
atctcacgaaatatagttggactggcacgacttcgtcctgatatatttggtaccactgag
gaggaagtatcaaatgctgtcaaggcagagattgaaaagaagaaagaagatcaaccgaag
caggtcatatgggatggccatactggaagcattggccgtacagcaaatcaagctatgtca
cagaatcttgaggatcagaatgatgctactaacaatgatgcaaggaacctcccaggccct
gcagccttgccaccgaaacctggagtgccttcagttcgtcctctcccgcctccacctgga
ctagccctgaatcttccttccctacctatgaatgcacactattctaccccaattagtggt
gggcttcctatacccccaccacaaccgcctgtcatctcaatgattccttctgttcagcca
ccacctcctgcaatgcctggacaacaatcatttttcatgaatcggcctccttctatgcct
ccacaaatgtctatgaatgcaccaaatatgagtgtcccacccccaccgggatctcagttt
actcacatgcaagttccacggccttttgttcctctccctgcccccccacctatgaatact
atgatacctcctccacctatgccacaaggagttcctccaccacctatgccccaaggattg
atgcctcccttaccacctgacgaagctcctcctccgcttccagatgaaccagaaccaaag
agacagaagcttgatgattctttgcttatgccggaagaccagtttttggcacaacatcct
ggacctgtccgtatcactgtatctgttcccaatcttgatgatggaaatctcaaaggtcaa
gtcctggagattactgtccagtccctcactgaaacggttggaagtttaaaagagaagatt
gccggtgagatccagcttccagcaaacaaacagaagttgagtggaaaacccggcttcctc
aaggacaatatgtcgcttgcttattacaacgttggagcaggtgaaggactttccctctct
ttaagggaacgtggtggtagaaagagatga

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