Cucumis sativus (cucumber): 101214826
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Entry
101214826 CDS
T02486
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1
KO
K28108
shortage in chiasmata 1
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101214826
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101214826
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
101214826
NCBI-ProteinID:
XP_031739137
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Position
3:complement(40734330..40744192)
Genome browser
AA seq
1657 aa
AA seq
DB search
MRTRFLHIDYFASETHSFHSLPVPHLISIPFSTLSDLLHFHFLPQFSLPIHNLSIHSSAL
AKFFDHVLPRTIHDDVHHASDPSSRLQGIFSSESVQTRFLEEEAKGTYEENMEGDWKNFG
SETSEIEFVKKDTGADAKNRNLAYDVIQFETPQLDAYLENALLFEKEEAQVLTVLSEAEF
DLETLNLGLLKYPSEVKESVYAVECIISEYLLDQRSCLFEDDFSQDRRLLDQSTFPFLEV
DEIVLETLALLSLQDEIFFILDNTEPDRIQDVSLLVSNEEYLCSMKCDIEEFLSDHILDP
CEVSEIVSSDIFGGSEPMSLIETLEIPGSSAIQTKSTFDFPIGPASFEEFQLLDVSMDQP
FGVFFDLELSFLSEISDCISIESTDFKNFNELIVCHELALVDDTFKSLPVPILSSQGSER
PLLAFIEDALANLNVQSLSASDDIYLDWYLLEENSCSSGIYLSYHNMLEEINLKPMEFDQ
EPFENDSTFYIYVFSDEDLVRETTEDKGELKESFPNGISMLPSQTFIVDSSKLLNDRCQR
QDIAAVGNTAKTSSSWKSKSESSDPDFFLNFQKPVGMGKSESVFSTTNTNTMLPRVPCDG
KLTNKPLISSTDGSSKQLNVEVHQVFLSDNILHLINNSEKTYLAILQNETGLRKTYLPYV
ADDYSLMLSLPKQKLIDCIEKIYLRGSSTYWEEKIMTLAMLYAIKQIGWYLCFYGIYPAH
LYLKKLCQSLECLQSRLGFLASLIEEAGNSVDREITSSHPALTTIQDILCSKTSTSTLKV
LIVANQIFWWSLKKLLRSLGLSFEELNYGSPTNDQVSNATITVDGLVSTCLLVSQEYVSG
SFPFNKFRIILEYGGPDGSSQISTYFSNLIDMPHLHFVMLELDNCGNSKAFCEGVDLPQH
NELTIEEKSLVENQARLLKKLLNFLPVEEKHTLASPEATIEADDCRVPLRVPAGSVLEKP
QHIDLMSFPEAITIVNTQKFEKEMIVCRRSSYQRILALEKEGVQVVERDMSLPVDLIITS
GICLMWYDCTNIIKKASTSNEASLCLNLCIENIATDLLTSLSLAFQGCVLVFEGEINFLS
IVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIQNVSKFTTRRLYPKMSESETL
AESFLTSFPSINPLTAHGILSSESILADFLEWPHERRLQAIRKYCIPDESVYLFSALCKY
GEREDSKSVMTDCSSSVSSGPDSEICHFNGNSDRKRRNFTGGTQYINENMEFLSSYRLKP
FTADTPETLAAASKSFCSQMFEDPEILGDLKGLSSSVNNLFNQNHNLEPFDATISMDPTR
VCKPRDSWISTAPEISDEIRGRCSSFVQNQGLDRNKKKVQSYHNMNTSENQPEELIDEVV
NLADNAILKDHFPTMAPLNFLPSMHDNEKDSSRKFKIQRRLSYGQSDDPFCAGDVGNNSS
SDFWSSINLHGRSLPGLDSHFPDPSFEPIIMPLQYKDHHSDDRLVQTPVKDSKLLFSLAQ
KGTSHSDVTPLSNALRSKNLQESSPWTMEFLNRIREKSKNRRNFVPRCSSSPFPENLSNV
KKTVKRSSSILEFFKYQGGSTLKKPDQKRQKQSLQSSNSSKNVLSAPSSELSSWTPIDKR
SRQTLSFATDGNGSQTKLVWCNDNYGLGKSSKKLGNK
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcgatttctccacattgattactttgcttccgaaacccattccttccactct
ctccctgtccctcacctcatttccatcccattttctaccctctccgacctccttcacttc
cattttctccctcaattctctctcccaatccataacttatctatccattcttctgctctc
gccaagttctttgaccacgttcttcctcgcacaatccacgacgatgttcaccatgcttct
gatccgtcttcgagactccaagggattttctcttccgaatctgttcaaactcgatttctg
gaggaagaagccaagggtacttacgaagaaaatatggagggggactggaagaattttggt
tccgaaacttcagagattgaattcgtaaaaaaggatactggggctgatgcaaagaataga
aaccttgcatatgatgtgatccaatttgaaacacctcagcttgatgcatacttggaaaat
gccttattgtttgagaaggaggaggcacaagtccttacagtattgtcagaggctgagttt
gatcttgagacactgaatctagggcttcttaaatacccttccgaggtcaaagaatcagtt
tatgctgttgaatgcattatctcagaatatctcttggaccaaagatcttgcttgtttgaa
gacgatttttctcaggacaggaggctattggatcaatcgacctttcccttcttagaagta
gacgagatagttcttgaaactttggcattattatccttgcaggatgaaattttttttatt
cttgataatactgaacctgaccggatacaagatgttagtttacttgtcagcaatgaagaa
tatttgtgctccatgaagtgtgacattgaggagtttctttcagatcatattttggaccca
tgtgaagtttctgagatcgtatcctctgatatttttggaggatcagagccaatgagcttg
atagaaactttggaaattccaggaagctctgcaattcaaacaaaatcaactttcgatttt
cctataggacctgctagttttgaggaattccagctgctggacgtatccatggatcaacct
tttggagtcttctttgatttggaactatcattcttgtcagaaatcagtgactgtatatcc
attgaaagcacggatttcaagaatttcaatgaattgattgtttgtcatgaacttgctctt
gtagatgacacatttaagtcattacctgtacctatcttatctagtcagggatctgaaaga
cccctgcttgccttcatagaggatgctttagcaaacctcaatgtacaatcattatctgca
tctgatgacatatatttggattggtatctattggaggaaaatagctgcagctctggaatt
tatttgtcgtatcataatatgttggaagaaattaatctgaaacccatggaatttgatcag
gaaccttttgaaaatgatagtacattttatatatatgttttctcagacgaagacttagtc
agagaaacaacagaagacaagggtgaattgaaggagtcttttcctaatggtatttccatg
cttcctagtcaaacttttattgttgattcaagcaaattattgaacgacagatgtcaaagg
caagatattgcagctgttggaaatactgcaaagacttcatcgtcatggaaatcaaaatca
gagtccagtgatcccgactttttcttgaattttcagaagcctgttggtatgggaaagagt
gaatctgtatttagtacaacaaacaccaatacgatgctccccagggttccatgtgatgga
aaattgactaacaagcctcttatctccagtaccgatggtagttcgaaacaattgaatgtg
gaagtacatcaagtttttctgtctgataacattttacatctcatcaacaactctgagaaa
acttatctagctatcttgcaaaatgagacagggctgaggaagacatatcttccatatgta
gctgatgattattctttaatgctcagtcttccgaaacagaagttgatagactgtattgaa
aaaatatacttgcgaggatcaagtacctactgggaagaaaaaataatgacattagccatg
ttatatgccattaaacagataggttggtatttgtgtttctacggtatctacccagctcat
ctatatctaaagaagttatgtcagagcctggagtgtttacaatcgaggttgggtttcttg
gcgtccttgattgaggaggcaggaaattcggttgacagagaaattacctcatcacatccg
gcacttactactatccaggatatcttatgctcaaagacttcgactagtactctcaaagtt
ctgattgtagcaaaccaaattttctggtggtcattgaaaaaattgctcagatccttggga
ttgtcttttgaagagctaaattacgggagtcctactaatgatcaagtgtctaatgcaacc
attacggtggatggccttgtttccacttgtttgttggtatcccaagagtacgtatctggg
agttttccattcaacaaatttcgcattatcttggaatatggaggtcccgatggctcttct
cagatctccacttatttttcaaatttaattgacatgcctcatctacattttgtaatgtta
gagctggacaattgtggaaattctaaagcattttgtgaaggtgttgatctgcctcaacat
aatgaactgacaatcgaagagaagtctttggtggagaatcaagccaggttgttaaagaaa
ttgttgaactttttacctgttgaggaaaaacacacattggcatctccagaggcaacaatt
gaagcggatgattgcagagtgcctctacgagtgccagcaggatcagtcttagagaaacct
caacatatcgacctcatgtcatttcctgaagcaattactattgttaacactcagaaattt
gaaaaggaaatgattgtatgtaggagaagttcgtatcaaagaattcttgcattggagaaa
gaaggtgtccaggtcgtggaacgtgacatgagtttgcctgtggatctaataattacttct
gggatttgcttaatgtggtatgactgcacaaatattatcaagaaagccagtacatcaaat
gaagcttctttgtgcttgaatttatgcatagagaatattgcaacagatcttttgacatct
ctaagtttagcttttcagggttgcgttctggtctttgagggagaaatcaatttcctttcc
attgtaatggaatcatcagatggactgtatgctgcagcagcaagtttggaaattgatttt
cagctcttctgttcctattcatctgagttgacagatgaaattatcctgggctgcattcaa
aatgtttctaagttcacgactaggcgcctataccccaagatgtctgaatcagaaactctt
gcagagtcatttcttacgagtttcccttcaattaatcctttgacagctcatgggatactt
tcttcagaaagcattcttgctgactttctagagtggccacatgagcgcaggctccaagca
attagaaaatattgtattcctgatgaaagtgtctatctatttagtgctctgtgcaaatat
ggtgagcgggaggattcaaaatcagtgatgacagactgctcctcttcggtatcttctggt
cctgattcagaaatttgtcactttaatggtaattctgatagaaagaggagaaactttact
ggtggtacacaatacattaatgaaaatatggagtttttgagttcctataggctgaaaccg
tttactgcagacactccagaaactttagcagcagcatccaagtcgttttgttctcaaatg
tttgaagatcccgaaatccttggtgatctcaaagggttatcttcatctgtaaataatttg
tttaatcaaaaccataatttagagccttttgatgcaactatatcaatggatcctaccagg
gtgtgtaagccacgtgattcttggatctctactgctcctgaaatctccgatgagattaga
gggcgttgctcatcatttgttcaaaatcaaggactagaccgaaataaaaaaaaagtacag
agctaccataatatgaatacatctgagaatcagcctgaggagcttattgatgaagtagtt
aacctggctgataacgctatattaaaagatcactttccaactatggctcctttgaatttc
ttgccttcgatgcatgataatgaaaaagattcatcaagaaagttcaaaattcaaagacga
ttgtcttatggacaaagtgatgacccattctgtgcaggcgatgttgggaacaactcaagt
tcagatttttggagttctatcaatttgcatgggcggagtttgccaggattggacagtcat
tttcctgatcctagttttgaacccattattatgcctcttcagtacaaggatcaccactca
gatgatcgtttagtacaaactcctgtaaaagattcaaaattattattttcactcgcacag
aaaggtacatcacattctgatgtaaccccattgtccaatgccctccgttcaaaaaatctt
caagaaagttcaccttggactatggaatttcttaaccgaattagggaaaaaagtaaaaat
cgtcggaattttgttccacgttgctcctcttcaccttttcctgagaatttgagtaatgta
aaaaaaactgtcaaaagaagctcctccattcttgaatttttcaagtaccaagggggcagc
actctgaagaaaccggatcaaaagaggcagaaacaatcattgcaatcatcaaattcgtcc
aagaatgtattatcagctccaagtagtgaactttcttcatggacgcctattgataaaaga
tcaagacagactttatcttttgcaactgatggcaacgggagccaaactaagcttgtctgg
tgcaatgacaattatggtttaggaaaaagctcgaagaaacttggtaataaatga
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