Cucumis sativus (cucumber): 101214868
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Entry
101214868 CDS
T02486
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101214868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101214868
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
101214868
Prokaryotic type
Archaeal type
TFE
101214868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
wHTH-PRTase_assc
Zn_Ribbon_TF
GntR
Dimerisation
MerR
CggR_N
Motif
Other DBs
NCBI-GeneID:
101214868
NCBI-ProteinID:
XP_004138223
UniProt:
A0A0A0LSL9
LinkDB
All DBs
Position
1:complement(2232776..2241497)
Genome browser
AA seq
476 aa
AA seq
DB search
MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGPHHSKEGDEKIKM
HTHSYCSLDYAQVYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
FEDEYFHCENCNGELVAESDKLAAVQGVDGDDNVRKRRHEKLKDMLQKMEAQLKPLVEQL
SRVKDLPVPEFGTLLAWEARASAAARGINGDLNGNDPSKSSQGYGGTPMPFVGETKVEVA
FSGAEGTGVDAKSESENTSLKVLPPWMIKKGMNLTKEQRGEVKDESKTDAGSASAQFSDD
KKSLANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQQELSSTEVTESVANTNSSRQV
GMKAKREEDEDDDIEWEEAPIGGNANENYKVDLNVEASALVEEEEEEDDDVDWEEG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgaaccttttaacaggttggtgaagctagctgcgagagctttctacgatgac
attaccactaaaggggataatcaacccaaaaccggtcggagtgataataggggaattgcg
gttgttgttcttgatgctcttaccagacggcaatgggttcgggaagaagatttggcaaag
aacttaaaactacattcaaagcaattacgtcgaaccctaaggtttttagaagaggaaaaa
ctgattacccgagatcatagaagggagacagccaagggagcaaagatatttagtgctgcg
gttgctgccacagccgatggtccacaccattcgaaggagggggatgaaaagattaagatg
cacacacactcttattgctcactagactatgcacaggtttatgatgtggttagatacaga
atgcaccgcatgaagaagaaactgaaagatgaactggaggacaagaacacagttcaagag
tatatatgccctaattgttcgagaaggtacactgctttggatgctcttcgattaatctct
tttgaggatgaatacttccattgtgaaaattgcaacggagagctagttgcagagagtgac
aaactggctgctgtccaaggagtggatggagatgacaatgtcaggaagcgtcggcatgaa
aagttgaaggacatgctccaaaagatggaggcccagcttaaacctttagtggaacaactc
agcagagtcaaagatttgcctgttccagaatttggaactcttttagcatgggaagctcgt
gccagtgcagctgcacggggtataaatggtgatcttaatggaaatgatccctcaaaatca
tcacaaggttatgggggaacacctatgccttttgttggcgagaccaaggttgaagttgcc
ttttctggcgctgagggtacaggagtggacgctaaatctgaatccgagaacacaagtctg
aaagttttacctccttggatgatcaagaaaggaatgaacctcacaaaggaacaacgcgga
gaggtcaaagacgagtcaaagacagatgctggttcagcttctgctcagttttctgatgat
aaaaagtcattggctaacgatgatgataaaacaaatatacaggatgagtatgttaaagct
tattatgctgctatactgaagaagcaacaagagcttgaagaagctgctaagggacaacag
gaattatccagtacagaggttactgaaagcgtggctaacacaaattccagtcgtcaggtg
ggaatgaaggccaaacgtgaagaggatgaagatgatgatattgagtgggaggaggctcca
ataggtggtaatgcaaatgaaaattacaaggttgacttgaacgttgaagcctcagctttg
gtagaagaagaagaagaagaagatgatgatgtggattgggaggaaggttga
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integrated database retrieval system
