Cucumis sativus (cucumber): 101214878
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Entry
101214878 CDS
T02486
Name
(RefSeq) protein LHY isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101214878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csv03000
]
101214878
Transcription factors [BR:
csv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
101214878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
101214878
NCBI-ProteinID:
XP_011656825
LinkDB
All DBs
Position
6:6710374..6723738
Genome browser
AA seq
736 aa
AA seq
DB search
MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV
LTLVSSSQRKQILDLEKEPLNEGTSGEEQATIEKDAHDDNYSEVFTLSREANSISWKNTN
CVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSCVLS
GDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNPSDC
VSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNPAAH
AIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAAHGL
LPLCAPFHSAFPSAGVSAPVVQSSDTCQNLESKDKAESSQQIVALQNQQLDAEQSEALTA
QHSGSKLPTHSSSDSEGSGGANANDTVKPAHDEKTPAEVEFHDSNKGKRGKQVDRSSCGS
NTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSESWKEVSDEVKR
GRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDLNGKTCGSF
SHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKRMTTSSNHC
EEGGQKRLRLEQKVTN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaactcctcaggagaagacttggttttcaagaccaggaagccatatactatt
acaaagcaacgagagcgttggacggaggaggagcacaacagatttctagaggcgctgaag
ctctatgggcgagcatggcagagaatcgaagaacatattggaactaaaactgcagtccag
atacgaagtcatgcgcaaaagtttttttcaaagttggaaaaagaagcacttgtcaagggg
attcctgtaggacaaactctggatatagatattccaccacctcggcctaagaggaaacca
agtaatccttatccaaggaaaactcctatatcaaagttgggtgctaatgacgggaaggtt
ttgactttggtgtcttcttcacagaggaaacagatcttagatttggagaaagagccactg
aatgagggcactagtggagaagaacaagcaacaattgaaaaggatgcccacgacgacaat
tactcagaagtatttaccctatcacgagaggccaactccatttcttggaaaaacacaaat
tgtgtaccttcgcaagttaaactaaatgactcatgtgctttcagggagtttgtgccctca
cttaaagagccactccaggataaaggcccgggcaaagttttagaaatggagatctcaagc
acttcacaagaaaagtctatgcctgctgaaaagaaagaagctttaagctgcgtactgtct
ggagatgaaatgcaagctgctcataattatccaaggcatgtgcctgtgcatgtggtagat
ggaagcttgggagcaaatgttcaagggtcagtaaccgatactctgctgcaggaatccact
tttcatccagcaatggaggttcgaggagagcataatataattgggaatccatctgattgt
gtttcctttgaacatcaaaataatgcacctaggtgcgtttatcaatcatatccaacaatt
catcctactccatttaccttacttcgccctaaccaagagcattataagtcacttctgcac
atgtcctcctcattttcaaatcttgttgtgtctacccttcaacaaaaccctgctgctcat
gcaatagctagtttgacagcaacatgttggccctatgtgaatcctgaaacttctgtagat
tctcccgtttgtgataaggaaggttctggaaccaagcaaatgaaccccaccccaagtatg
gaagccattgctgcagcaactgtagcagctgcaactgcatggtgggcagcccatggactg
ctacctttgtgtgctccttttcattctgcctttcccagtgccggtgtatcagctcctgta
gtacaatcatcagatacctgtcaaaatcttgagtccaaagacaaagcagaaagttcccaa
caaattgttgctttgcaaaatcaacagctggatgcagaacaatcagaagctttaactgct
caacactcaggttccaagttacctactcattcatcttctgattctgagggtagtggaggt
gcaaatgcaaatgatacggtgaaacctgcccatgacgagaagacacctgctgaggttgag
tttcatgattcaaacaaagggaagaggggaaaacaagtagatcgttcctcgtgtggttca
aatacaccatctggaagtgatcaagagatagatgcaacagaaaataatgataaagaagaa
aaagaggaagaaaatgatcttgagatgaatcgtccagctgtcgagttaagcaatcgccgc
aatagaagtatcagtaacacaagtgaatcttggaaggaggtttctgatgaggtaaaaagg
gggcggctggcttttcaagctctcttcactcgtgatgtattgcctcaaagcttttcacct
ccctatgatgtagaaaatgagaacaaggcaagtgagaacgttgagaaagatagtcatgtt
gtagataaagatagtggtgcatcagttttggaccttaacggcaagacttgtggatctttt
agtcatcaaagtatggagagagatacatcagcaataggtatcaacaatggagagggagaa
cttctcacaattggactaggaaatggaacccccaaggcttgtcgaaccggattcaaaccc
tataaaagatgttcagtggaagcaaaagaaaagagaatgacaacatccagcaaccactgt
gaggagggaggtcaaaaaagactacgcttggagcagaaagtcacaaattga
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