Cucumis sativus (cucumber): 101214886
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Entry
101214886 CDS
T02486
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101214886
04121 Ubiquitin system [BR:
csv04121
]
101214886
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101214886
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101214886
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101214886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
CxC4
DUF1272
Zn_ribbon_IFT122_C
zf-RING_16
Rad50_zn_hook
zf-C3H2C3
HypA
Motif
Other DBs
NCBI-GeneID:
101214886
NCBI-ProteinID:
XP_004144313
UniProt:
A0A0A0L0T9
LinkDB
All DBs
Position
4:complement(18679844..18682700)
Genome browser
AA seq
299 aa
AA seq
DB search
MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG
ITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVC
KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQGIGGGGGGHSTNDQNR
SNSYNNGSGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSGYRYTSSP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctggtcggaacacccattggtgttatagatgcagaaggtcagtacgtctccgt
ggtagagatgcagtttgccccaactgcaatggaggatttatccaagaacttgatgatatg
gtgcctggaaatccatttgatttctttggtctagatcatgatgaagatcgcgatcatggt
ctgggtgcattctctgcttttatgagacaacgtttagccgaaagaaatgacatgagggga
agatcagagtcactttttgagcatagcccgggatttggtcctctattaatatttggtggt
caaataccgttgagaaacagcaggttagaagctctcttcaatggggctcctggcattggt
attacacggggcgatagtggtgactacttcataggccctggactggaggagctatttgaa
cagctttcagaaaatggtcatcgtggccctccaccagcatctagatcatcaatcgatgca
atgccaacagttaagatcacgcaacgacatcttcgctcagattcacattgtccagtttgt
aaagagaaatttgaactggggtctgaagcaaggcagatggcttgtaatcacatgtaccac
tcagattgtattgttccatggctaatccagcacaattcttgccctgtctgccgccaggaa
ctgccaccacaaggaataggaggtgggggtgggggacatagcaccaacgatcaaaaccga
agcaacagctacaacaacgggagtggctcccgggtcaatccaggtagacgcaatccattc
tcttatctgtggccgtttcggtcatctagttctaactccaaccatggcggagcagggagc
agtgaaccgtcgaaccaccaaatggggtattcaggatatcgatacactagttcaccatga
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