Cucumis sativus (cucumber): 101215444
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Entry
101215444 CDS
T02486
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101215444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101215444
03016 Transfer RNA biogenesis [BR:
csv03016
]
101215444
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
101215444
Messenger RNA biogenesis [BR:
csv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
101215444
Transfer RNA biogenesis [BR:
csv03016
]
Prokaryotic type
tRNA degradation factors
101215444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
OB_PDCD11
KH_PNO1_2nd
Urease_gamma
CvfB_2nd
DUF1057
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
101215444
NCBI-ProteinID:
XP_004141096
UniProt:
A0A0A0LFJ2
LinkDB
All DBs
Position
3
Genome browser
AA seq
1032 aa
AA seq
DB search
MASMATKANPLFSTIPHFLTWRSLGFRTICCGRMGFSSQSQQQVDPNTTLGRTKVLETFE
EVFEIGSRLVKLETGKIARFANGAAVLGIEETKVLSTVASAKGDAARDFLPLTVDYQEKQ
FAQGVIPGTFTRREGAPKERELLCGRIIDRPIRPLFPAGFYHEVQVMASVLSSDGKQDPD
VMAANATSAALMLSDIPWGGPIGVIRIGRIDGQFVVNPTMDELNLSDLNLIYACTREKTL
MIDVQAREITEKDLEAGLRLAHPEAVKFLEPQIRLAAKAGKLKKEYKLSMVSDSTLEKVA
KLAESPIEAVFTDPSYGKFERGEALEKITEDVKKVFEEECYEEGLKVLPKAVDYVRKKVV
RRRIIAEGRRLDGRRLDEVRPLYCESSYLPILHGSSIFSRGDTQVLCTVTLGAPADAQHL
DSLVGPPTKRFMLHYSFPPFSINEVGKRGGLNRREVGHGTLAEKALLAVLPPESEFPYAV
RINSEVMASDGSTSMATVCGGSMALMDAGVPLNEHVAGVSVGLVSETDPSTGAIKDYRIL
TDILGLEDHLGDMDFKIAGTRKGVTAIQLDIKPAGIPLDIICESLEHARKGRWQILDHME
REINAPRMKDDENCPRLVTLKYTNEALRRLIGPLGIVKKKIEAETGARISVGDGTLTILA
KNQAVMENVQDRVDFTLGREIEIGGTYKGVVSSVKEYGAFIEFNGGQQGLLHISELSHDP
VSRVSDIVSVGQKISLRCIGQDVHGNIKLSLKALLPVPKAKGPNGNSVSSLESLPSVGEV
YKTQPKTQNSTSNIPAVDKGVGSEVNPTSSVPSVLIRSAEDCDVEEKKSAVKNLKLKNTQ
KLNNASTSDEDCDEEEKQSAVNNRKQKNTRKLKTTSKSDENCDEEEKKSAVKKPKRKTTQ
KQNTASTSAEDCNEEEKKSAVGNLKLKSTKKLNATSRSKGQSKPLTQNDVNNNEVEVQDP
LTPSNLRIGTKVKAKIYQIRLHGLVLDLGGGVRGMYRFEGDNQSNYKVGDELHVQCSSFS
GRGIPVMSLVNN
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatggctaccaaagcgaacccacttttttctaccattcctcattttctaact
tggaggagcctcggctttcgtaccatttgctgtggccgtatgggcttctcctcccagtcc
cagcagcaggttgatcccaatacaaccctcggtcgaacaaaggttctcgaaactttcgaa
gaagtttttgagattgggtcgcgcttggttaagttggaaactggaaagatcgctcgcttt
gctaatggcgcagcggttttgggcattgaagagaccaaggtcttgtctactgttgcctct
gctaagggggacgccgctcgtgattttttgcctctcacggtggattatcaagagaagcaa
tttgcacaaggtgttattccgggtacattcacgaggagagagggggctcccaaagagcgg
gaacttttatgtggccgcattatagatcgtcctattaggccattgtttcccgctggattt
taccacgaggtccaggtaatggccagcgttctttcttccgatggtaaacaagatccagat
gttatggcagctaatgcaacatccgctgctcttatgttatcagatattccttggggtggc
cccattggagtgatacgtataggaagaattgatgggcagtttgttgtcaacccaacaatg
gatgagcttaacttgagcgacctcaacttaatatatgcctgtacaagggagaaaactttg
atgattgatgtccaagcacgtgaaatcacagaaaaagatcttgaagctggattgaggttg
gcacatcctgaagcagttaagtttcttgaaccacaaatcagactggctgctaaagctgga
aagctgaagaaggaatacaagttgtccatggtgtcagatagtacattggagaaagttgcc
aagttagccgaatcccctattgaagctgttttcactgacccctcttatggcaagtttgaa
cgtggtgaggccttagagaagatcacagaagatgtaaagaaggtatttgaagaagaatgc
tatgaagaaggcctgaaggttttgccaaaagcagtagactatgtgaggaaaaaggttgtc
cgcagaagaatcattgccgaaggacgtagacttgatggtagacgtcttgacgaagttagg
cctttgtattgtgaatcgagttatttacccatacttcatgggtcatcaattttttctcga
ggagatactcaggttctatgtactgttacacttggagcgccagcagatgctcaacatttg
gattctctcgttggaccaccaacaaaacgttttatgcttcactatagcttccccccattt
tcaataaacgaagtgggaaaacgaggtggcttaaataggcgtgaagttggccatggtact
cttgctgagaaagctttgctcgctgtgttacctcctgaaagtgaatttccatatgccgtc
cgtataaactcagaagtcatggcctcagacggttcaacatcaatggcgactgtttgtgga
ggtagtatggcattgatggatgctggggttccgttaaatgaacatgtggctggggtttca
gtgggccttgttagtgaaactgatccatcaactggtgcaattaaagattaccgtatcttg
actgatatactgggacttgaagatcatctgggtgatatggacttcaaaatagctggcaca
cgaaaaggtgttacagccattcagttggatataaaacctgctggaattccattggacata
atatgtgagtccctagagcatgcacgtaaaggtcgttggcaaatacttgaccacatggag
cgtgagattaatgcaccacgtatgaaggatgatgaaaactgtcctcgattagttacccta
aagtatactaatgaagctcttcgtcgcctaattggacctcttggtattgtgaagaaaaag
attgaagcggaaacaggtgcacgcatatcagtaggtgatggtactcttaccatattggct
aaaaatcaagctgtgatggaaaatgtacaagatagggttgatttcacacttggccgtgag
attgaaattggaggaacttataaaggtgttgtaagttcagtaaaagagtacggtgcattt
attgagtttaacggtgggcagcaaggccttcttcacatctcagagttgtcacacgatcca
gtctcccgggtttccgatattgtgtctgttggtcagaagattagcttgaggtgcataggt
caagatgttcacggtaacattaaattgtcccttaaagcattgttgcctgtaccaaaagcc
aaaggtccgaatggaaattctgtttcttctttggaatcacttccttctgttggagaagta
tataagacgcaacccaaaactcagaattctacatcaaatatacctgcagtggacaaaggt
gtaggtagtgaggtgaatcctacttcgtcagttccatctgtccttattcgaagtgctgaa
gactgtgatgtggaagaaaaaaaatctgctgttaagaacctgaaacttaagaatacccaa
aaactgaacaacgcttctacaagtgatgaagattgtgatgaggaagaaaaacaatctgct
gtcaacaacaggaaacaaaaaaatacccgaaaactgaagaccacttctaaaagtgatgaa
aattgtgatgaggaagaaaaaaaatctgctgttaagaaaccgaaacgtaagacaacccaa
aaacaaaacactgcttctacaagtgccgaagattgtaatgaggaagaaaagaaatctgct
gttgggaacttgaaacttaagagcactaaaaaactgaacgccacttctagatcgaaaggc
cagtcaaaaccgttgactcagaatgatgtaaataacaatgaagttgaagttcaagacccc
ttgactccaagtaatctgagaattggaacaaaagtcaaagcaaagatttatcagatacga
ttgcatggtttagtacttgatttgggtggaggggttcgtgggatgtatcgattcgaggga
gacaaccagagcaattacaaggttggggatgagttgcatgttcaatgctcgagtttttcg
ggccgtgggattcccgtgatgtcgttggtcaataattag
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