Cucumis sativus (cucumber): 101215523
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Entry
101215523 CDS
T02486
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101215523
03041 Spliceosome [BR:
csv03041
]
101215523
03036 Chromosome and associated proteins [BR:
csv03036
]
101215523
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101215523
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101215523
mRNA cycle factors
Common to processing body (P body) and stress granule
101215523
Spliceosome [BR:
csv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101215523
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101215523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Mcm-like_N
Motif
Other DBs
NCBI-GeneID:
101215523
NCBI-ProteinID:
XP_004142160
UniProt:
A0A0A0L1R4
LinkDB
All DBs
Position
4:13642385..13648584
Genome browser
AA seq
627 aa
AA seq
DB search
MRTSWADLAASSAAENVAAGSANNCSAGTTTAPGRSAYVPPHLRNRTAPADLPAAANSGP
AVGNDRSGHAGSRWGGGPRNDYNNRSGYSGGSRGGGWGGSRGGGWDRGRGDREVNPFGDE
EDTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKP
TPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSMPRPARGARTVYPLAL
ILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINLQLRDLERGVDILVATPGRLVDL
LERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQ
RLASDFLDKYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQGKQSLT
LVFVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAARG
LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNASLARSLADLMSESN
QEVPEWLIRFAARSAYTGGRNRRSGGGRFGSRDYRRESSFNRGGSDYYGGGNNNSGGGYG
GGSGGYGGGGGGGGGGYSGSGVTSAWD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcgtgggcagatttggctgcaagctcggctgctgagaatgtagctgctggt
tctgctaacaattgtagtgctggaactactacagcacctggccgatcggcttatgtacca
ccacatctgcggaatcgcacagccccggctgatctgcctgctgcagcaaatagtgggcct
gctgtgggaaatgatcgttctggacatgcagggtctcgctggggtggtggcccccggaat
gattataataatcgttccggttatagtggtggtagtcgaggaggaggatgggggggaagt
agaggaggtggatgggatcgtgggaggggggatcgggaagtgaatccatttggagatgag
gaggatacagaggaagcatttggagagcaagaaaatactggtataaattttgatgcttat
gaagatattcctgtggaaacaagtggtgaaaatgtaccccctccggtgaatacatttgct
gaaattgatttgggtgaagcacttaatcaaaacattcgacggtgtaagtatgtaaaacca
actcccgtccagcggcatgctattcctatctctcttgcagggagagacttgatggcttgt
gctcagactggatctggaaagactgctgctttctgtttccccattatcagtggcataatg
aagggccagagtatgccgagaccagctcgaggtgcacgcacagtgtacccacttgctctt
attctctccccaaccagggagctttcaatgcaaatacatgaagaagcaaggaaattctct
tatcaaacgggggtcagagtggtggttgcttatggaggtgcaccaatcaacctacagcta
cgtgatctagaaagaggtgttgatattcttgttgcaactccaggaagattagtagatttg
cttgaaagggctaaagtttcactgcagatgataagatacttggcccttgatgaagcagac
cgcatgttagatatgggatttgagccccaaattaggaaaatagtagaacaaatggacatg
cctccacctggggtaaggcagactatgctgttcagtgcgacttttccaagggagattcag
agacttgcctcggattttctagataagtatatatttctggctgttggaagagtgggctcg
agcactgatctaattgctcaaagagttgagtttgttcatgaagctgacaagagaagtcat
ttattggaccttcttcacgcacagagggcaaatggtgtgcagggcaagcaatctcttact
ctggtttttgtggagacaaagaagggagctgatgctcttgaacattggttatgcctcaat
ggttttcctgccactaccattcatggtgatagaacacaacaggaaagagaacaagcattg
aggtcatttagaagtggcaacactccgattttagtggcaactgatgtagctgctcgtggg
cttgacattcctcatgttgcacatgtggtgaacttcgatctccctaatgacattgatgat
tatgttcatagaattggacgaacggggagagctgggaaaactggtttagcaactgccttt
tttaacgagaacaatgcatccttggcaaggtccttggctgatctgatgtcagaatcaaat
caggaagttcctgaatggctaatacgatttgctgccaggtccgcctacactggaggaaga
aaccgtcgatctgggggaggccgatttggtagccgtgactatagaagagaaagctctttc
aacaggggtggttctgattattatggtggaggcaacaacaatagtgggggtggttatggt
ggtggttctggtggatatggaggaggaggaggaggaggaggaggaggatacagtggttca
ggggtgactagtgcatgggactaa
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