KEGG   Cucumis sativus (cucumber): 101215589
Entry
101215589         CDS       T02486                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101215589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csv03400]
    101215589
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101215589
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II PAXNEB
Other DBs
NCBI-GeneID: 101215589
NCBI-ProteinID: XP_011648756
UniProt: A0A0A0LS02
LinkDB
Position
1:2257804..2265192
AA seq 942 aa
MGDNVDEQTKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFIDDSH
FTNVESALVGIGCKECLLPLESGKSGDIKPLHDVLTKCGVMLTERKKSEFKMRDLVQDLS
RLIKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAVDLDQLENGEYMIASSYDDTLSKLKNVQ
ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFRPLAELLSELD
VLLGFADLASSCPTPYTRPDITSSNEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALAHGNTDLDSHGKQMAGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
EFANFPSSVVALAREKAAELEDFSIDTTASTTNGKEIPLKRKREFSSDDMSKGVERARQF
LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgggtgacaacgttgatgagcaaaccaagcttcccgagctcaaacttgatgctaagcag
gctcaagggtttctcgcattcttcaaaaccctaccccctgactccagagctgttcgattt
tttgatcgtcgggattactataccgcccatagcgataatgcagttttcattgcaaagacc
tattaccgtactacgactgctttacggcaactgggcaatgcatctgaagccctgtctagt
gtgagtgtcagcaaaaatatgtttgaatccattgctcgagatcttcttttggaaagaacg
gaccatacactagagctttacgagggtagtggttcgaattggagattgatcaaaagtgga
tcacctggcaatattggcagttttgaagatgttttgtttgcaaataatgaaatgcaggat
agtcctgctatcgtggcactgtttccatacttccgagataatgggtgcattgttggacta
ggctatgttgatttaacgaaaagagtgatgggaatggctgaatttatcgacgatagtcat
tttacaaatgtggagtcagctctggttggtattggttgtaaggaatgccttctgcctcta
gaaagtggaaaatctggtgatataaaacctttacatgatgtattgacgaagtgcggtgtg
atgctaactgagaggaagaagtcagaatttaaaatgagagacttggtgcaggatctttcg
aggctcatcaaaggttctgttgaacctgttcgagatttggtatctggttttgaatttgca
cctgctgccttaggagcactgctggcgtatgcagaattactagcagacgaaagcaattat
ggaaactataacatccagaagtacaatcttgatagctacatgaggctagactctgctgcc
attagagcattaaacgtcctagagagcaaaaccgatgcaaacaaaaacttcagtttgttt
ggtcttatgaatagaacctgtactgctggaatgggtaaaagattgctgcatatgtggtta
aaacagcctctgttagatgtcaaagaaattagttccagactggatcttgttcaggcattt
gtggaggacactgctctctgccaagatttgagacagcatctcaaacgaatctcagatatt
gaacgattgacgcattatcttgagaagagaagagctggattacagcatattgttaaactt
tatcagtcaagtataaggcttccattcattaaaaatgccttggagaactacgaaggacaa
ttttcctcattgatcaaggaaaagtacttggaatttctagagacctgtactgacaacgat
cacctgaacaagttcaataatctcgtggaaactgctgttgatcttgatcagcttgagaat
ggagaatatatgattgcatccagttatgatgatactctttccaaattgaagaatgtgcaa
gaatcaatagagcagcaaatacaggacttgcataggcaagttgctaatgatcttgatctt
ccagttgacaaggctttgaagttagacaaaggtacccaatttggacacgtttttagaatt
actaagaaagaagaaccaaaagtaagaaaaaagctctccacccacttcattgttcttgaa
acccgaaaagatggagtgaagtttacaaataccaaacttaaaaagttaggtgaccagtat
cagaaaatcgtcgaggagtacaaaagttgccagaaagatttggttcatcgagtaattgaa
actgcttcatccttcaatgaggtattcagacctttggcagagttgctctctgaattggat
gttttacttggttttgctgatttagcttctagctgtcccactccttatactagacctgac
atcacttcatcgaatgagggaaatattatattggaaggaagtaggcatccttgtgtggag
gctcaagactgggttaatttcataccaaatgattgtaaactagtaaggggtaaaagttgg
ttccagatcattactgggcctaacatgggtggaaaatctacatttatccggcaggtagga
gtgaacattctaatggcacaagtaggttgctttgttccctgtgacaaagctagcatttct
gttcgtgactgcatttttgctcgcgtaggtgcaggtgactgtcagcttcgtggagtttct
acctttatgcaagagatgcttgaaactgcatctatactgaagggagctacagagaaatct
ttgataatcattgatgaattgggccgtgggacatccacttatgatggatttggtctagca
tgggccatttgtgaacatcttgttgaagtgattaaagcacccactttgtttgcaacccac
ttccatgaacttactgcactagctcatgggaatactgatcttgattcccatggaaagcaa
atggctggtgtggcaaattttcatgtcagtgcacacatagactcatcaaatcacaagttg
acaatgctatacaaggttgaacctggagcatgtgatcaaagctttgggattcatgtagca
gaatttgcaaactttccttctagtgtcgtggcacttgccagagaaaaggctgctgaactg
gaagatttctccattgatacaactgcttcaaccactaatgggaaagagataccattaaag
agaaaacgtgagttcagttcagatgacatgtccaaaggcgtagaacgggctcgccagttc
ctagaggagttttctaatctgcccttggataagatggatctgaaggaagctctacaacaa
gtgagtcaattgcgagatggtttgaagaaggatgccgtggactctaattggctccaacaa
ttcctttga

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