Entry |
|
Name |
(RefSeq) small RNA degrading nuclease 5
|
KO |
K14570 | RNA exonuclease [EC:3.1.-.-] |
|
Organism |
csv Cucumis sativus (cucumber)
|
Pathway |
csv03008 | Ribosome biogenesis in eukaryotes |
|
Brite |
KEGG Orthology (KO) [BR:csv00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101215617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:csv03009]
101215617
Ribosome biogenesis [BR:csv03009]
Eukaryotic type
Pre-60S particles
RNases
101215617
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:complement(19568540..19595608)
|
AA seq |
572 aa
MPSSSVSGLDSEDDGQSNVGKTQEKPSFFDIYGADAKAEILFKTPESNSTLSLQDVQELV
NWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL
SCISDRMQTIDALLTCKVKRKRDANKVDLKNKLTSEPEISGLEKEAPISIKLPKELPFPV
TYYTLTAKALEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD
MEGRVLLDKLVKPSNAIVDYNTRYSGITCEMLSGVTTSLEDVQRIFLNLVHKETVLVGHS
LENDLMALRISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR
ATMELALLKIKHGPDFGSPPSLIRKKLLNILGESGKTSSFIDDIATVKRYCSESSHAFPV
TSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCDTKS
VNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDITLVQRLRKMLQEQ
SETSICREKIVKILEELHAQAEVALCFVCTKH |
NT seq |
1719 nt +upstreamnt +downstreamnt
atgccatcttcaagtgtttcaggtttggattccgaagacgacggccagtcgaacgtgggt
aaaacgcaggagaagcccagcttcttcgatatatatggagccgatgccaaagctgagatt
cttttcaaaactccggaatctaattcaactttaagtctgcaagatgttcaagaacttgta
aattgggtgcttgctgaaggtttcatgccgcgttgggtttttatcaagaataaaccccta
atcccaaaagtggttatggtttatctccctggcctggatgctgctctatacatgtcacag
tccaagatacttcctacatttaaaaaattctgcggcagtccaagggcagttttagctctt
agctgtatatcagatagaatgcaaacaattgatgcacttttgacgtgtaaggtaaagaga
aagagggatgcgaacaaagtagacctaaagaataaattgacttctgagccagaaatatct
ggccttgaaaaagaagcaccaatatctatcaagctcccaaaggagttacctttccctgta
acatattatacgctaactgccaaagcactggaagacaatggttatcctttcaatcaacca
ggttttatccaaacacttccggctcctgagggatgttcacctaatgaaatgttggcactt
gactgtgagatgtgtgtgacctgtgaagggtttgagctcacaagaataaccctggtggat
atggaaggacgggttcttcttgacaaattggtaaaaccatcaaatgcaattgttgattac
aatacgaggtatagtggaattacatgcgagatgttaagtggggtgaccactagtctggaa
gatgttcagagaatttttttaaatctggttcacaaggagactgttttagttggccattca
ctggagaatgacctgatggcattgaggatctctcatgatctggtagttgatactgcagta
ctttataagcatccccgtggcggctctcataaatctgcccttcggattcttgctaaaaga
tttctttctagggagattcaacaatctggaaatggccacgatagtattgaagatgcaaga
gctactatggaactagcacttcttaaaattaaacatggaccagactttggttcacctcca
tcattaatccgaaagaaactacttaatatacttggtgagagtggaaagacatcttctttc
attgatgatattgcaacggtgaagagatattgctctgaatcatcacatgcatttcctgta
acttctgatgatgaagctctttcaagggcaaaaaaggaggcaatgaatgagaaagttcac
ttcatctggacacagttttcagaattaaattcttaccataagaagcaggtagatgatgaa
gaaaaattaaatgtcaagcttgcagagttgctgtcattgcttacgtgtgatacaaaatct
gtcaacaagaaaaggaatagggccaagatctctgttgaactgcaggaaattttggctcgc
atggattctagaatcaatgacctctatacctcattacctactaatgctatgcttatcatt
tgcactggtcatggcgacataacacttgtacagagattgagaaaaatgctacaagagcag
agtgaaacaagcatatgccgtgagaagattgttaagatattggaagagctccatgcccaa
gctgaagtagctttgtgttttgtatgtacaaaacattga |