KEGG   Cucumis sativus (cucumber): 101215617
Entry
101215617         CDS       T02486                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101215617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csv03009]
    101215617
Ribosome biogenesis [BR:csv03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    101215617
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-GeneID: 101215617
NCBI-ProteinID: XP_004146782
LinkDB
Position
6:complement(19568540..19595608)
AA seq 572 aa
MPSSSVSGLDSEDDGQSNVGKTQEKPSFFDIYGADAKAEILFKTPESNSTLSLQDVQELV
NWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL
SCISDRMQTIDALLTCKVKRKRDANKVDLKNKLTSEPEISGLEKEAPISIKLPKELPFPV
TYYTLTAKALEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD
MEGRVLLDKLVKPSNAIVDYNTRYSGITCEMLSGVTTSLEDVQRIFLNLVHKETVLVGHS
LENDLMALRISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR
ATMELALLKIKHGPDFGSPPSLIRKKLLNILGESGKTSSFIDDIATVKRYCSESSHAFPV
TSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCDTKS
VNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDITLVQRLRKMLQEQ
SETSICREKIVKILEELHAQAEVALCFVCTKH
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgccatcttcaagtgtttcaggtttggattccgaagacgacggccagtcgaacgtgggt
aaaacgcaggagaagcccagcttcttcgatatatatggagccgatgccaaagctgagatt
cttttcaaaactccggaatctaattcaactttaagtctgcaagatgttcaagaacttgta
aattgggtgcttgctgaaggtttcatgccgcgttgggtttttatcaagaataaaccccta
atcccaaaagtggttatggtttatctccctggcctggatgctgctctatacatgtcacag
tccaagatacttcctacatttaaaaaattctgcggcagtccaagggcagttttagctctt
agctgtatatcagatagaatgcaaacaattgatgcacttttgacgtgtaaggtaaagaga
aagagggatgcgaacaaagtagacctaaagaataaattgacttctgagccagaaatatct
ggccttgaaaaagaagcaccaatatctatcaagctcccaaaggagttacctttccctgta
acatattatacgctaactgccaaagcactggaagacaatggttatcctttcaatcaacca
ggttttatccaaacacttccggctcctgagggatgttcacctaatgaaatgttggcactt
gactgtgagatgtgtgtgacctgtgaagggtttgagctcacaagaataaccctggtggat
atggaaggacgggttcttcttgacaaattggtaaaaccatcaaatgcaattgttgattac
aatacgaggtatagtggaattacatgcgagatgttaagtggggtgaccactagtctggaa
gatgttcagagaatttttttaaatctggttcacaaggagactgttttagttggccattca
ctggagaatgacctgatggcattgaggatctctcatgatctggtagttgatactgcagta
ctttataagcatccccgtggcggctctcataaatctgcccttcggattcttgctaaaaga
tttctttctagggagattcaacaatctggaaatggccacgatagtattgaagatgcaaga
gctactatggaactagcacttcttaaaattaaacatggaccagactttggttcacctcca
tcattaatccgaaagaaactacttaatatacttggtgagagtggaaagacatcttctttc
attgatgatattgcaacggtgaagagatattgctctgaatcatcacatgcatttcctgta
acttctgatgatgaagctctttcaagggcaaaaaaggaggcaatgaatgagaaagttcac
ttcatctggacacagttttcagaattaaattcttaccataagaagcaggtagatgatgaa
gaaaaattaaatgtcaagcttgcagagttgctgtcattgcttacgtgtgatacaaaatct
gtcaacaagaaaaggaatagggccaagatctctgttgaactgcaggaaattttggctcgc
atggattctagaatcaatgacctctatacctcattacctactaatgctatgcttatcatt
tgcactggtcatggcgacataacacttgtacagagattgagaaaaatgctacaagagcag
agtgaaacaagcatatgccgtgagaagattgttaagatattggaagagctccatgcccaa
gctgaagtagctttgtgttttgtatgtacaaaacattga

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