Cucumis sativus (cucumber): 101215672
Help
Entry
101215672 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101215672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101215672
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101215672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
HK_sensor_dom_bact
DUF6306
Motif
Other DBs
NCBI-GeneID:
101215672
NCBI-ProteinID:
XP_031743587
LinkDB
All DBs
Position
6:7283671..7292050
Genome browser
AA seq
757 aa
AA seq
DB search
MSGFGFGSSTSQSSSPFSSTTGFSFGSTNFSFGSSPSPLSLSSSSSSSSNPTSSSSPFPN
PTSNPSSSSFGFGSSSFSTSTSSPFSFSLASASTGASSSSAPSSAATSASSLFGVSSSST
GFNSFGFGASSSSANSSAPLFGAASSSGTSSTSLFGAGSLPAPSFGAAPSSGSSVAPSFG
ALSSSAGTSSAPLFGAAPSAGASSAPSLFGGASSATTSSAPLFGTSASAASSGSGLFGAS
AAASGSGVSLFGTPATSSGSTGSGLFGSSPFGASSSGTLSSASTSNLFASSLSTSPFQST
LSSSSSQNLTSSSPFVASPSGFSFPTGSLSKTTSITNVSSSSSSSLTLASTSSSSFSFGT
PASSSSQSSFGFSINNAASTGGSSAPSTTATKPTSLSLSNSVAPLFSTVTTTSASTPAAN
STTQPSFSVPAFSSSSSAATTLSIAASSAPSAASSGAVSSFTGFGVTSSASSSSAIGSLS
LPTKTSTAASSSQAPASFGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTST
VSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILL
RLEIEVAKVVETQAELEKKLELIETHQQEVDKALVSVEEDAERIYKDERGLLLDDEAAST
RDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSL
MWIDEKAEEFSSRIQKLAATEGPAADRELLGQKLWMS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttcggctttggatcttccacctctcaatcttcttctccattttcctcaacc
actggtttctccttcggatccaccaacttttccttcggatcatccccttcccctttatct
ctttcgtcttcctcctcctcctcctcaaaccctacttcctcttcctccccatttcccaat
ccaacgtccaatccttcttcttcttcctttggctttggctcttcctctttctccacctct
acttcctctcccttctctttctccctcgcctccgcttccaccggagcatcttcctctagc
gccccttcttccgcagcaacttcagcttcgtccttgtttggggtttcttcatcctcaact
ggattcaattctttcggattcggggcttcatcctcgtcagcaaactcctctgctcccttg
tttggggctgcttcctcctccgggacctcatccacctccttgtttggggctgggagctta
cctgcgccttcgtttggggctgctccctcctctgggagctcagttgcgccttcctttggg
gctctttcctcatctgccgggacctcatctgcgcccttgtttggggctgctccatctgca
ggggcatcatcggctccgtccttgtttggaggggcgtcttctgcaactacttccagtgca
ccattgtttggcacatctgcatccgctgcaagttcgggatcagggttgtttggcgcttct
gccgccgcttccggttctggtgtttctctgtttgggacaccagctacatcttcaggcagt
acaggttcaggtttgtttgggtctagtccctttggtgcatcttcttcaggcactttatct
tcggcttccacttcaaacttgtttgcgtcatctttgtccacttctccattccagagcacc
ctttcttcgagttcttcccaaaatttgacttcttcttcaccgtttgtggcttctccttct
gggttttcatttccgaccggttctttgtctaaaactactagtattaccaatgtatcttct
tcttcttcttcttctcttacactagcctctactagttcctcgagcttctcattcggaaca
cctgcttcgtcgtcatctcaatcttctttcggatttagtattaacaatgcagcatcgacg
ggagggtcgtctgctccgagcactacagctacgaagcctacttctttatcgttatcaaat
tctgtggcacctttgttctctacggttactaccaccagtgcttctactccagctgccaat
agcacaactcagccatccttctccgtgccagcttttagttcgagttcttcagctgctact
accttgtccatagcagcatcttccgctccctcggctgcttcgtcgggtgctgtgagttca
tttactggttttggtgtcacaagctcggcttcttcatcaagtgcaattggttccttatcg
ttgccgaccaaaacatcaactgctgcttcatcatctcaagcgccagcctctttcggtttc
ccttctttggcatccgcttctacggctgctaccaccacatccggtttcagtgcttcaagt
cagagtcagacttcatcagctcttgttgtagcaagcagtagtagtggtacaacttcaact
gttagtgcaacagtttcttctacaccaaaattaccatctgagataacagggaagactgtc
gaagagatcataaaggaatggaatgcagagctccaagagcgtactggaaagtttcgaaag
caggccaatgctattgctgagtgggataggaggattatgcaaaatcgtgatattcttctt
agacttgagattgaggttgcaaaggtggttgagacccaagctgagttggagaagaaattg
gagttgatcgaaactcaccaacaagaggttgacaaggcattggtaagcgtggaagaagat
gctgagcgcatttacaaggatgaacgtggtttacttcttgatgacgaggctgcatctaca
agggatgcaatgtatgagcaagctgaatatatagagcgggaattagagcagatgacagaa
cagatcaaatcaattatccagaccctaaatgcgaaccagggaggtgaacttgatgtgatt
gatgggatgacaccgctagatgctgttgttcgaattttaaacaatcaattaagttcatta
atgtggatcgatgaaaaggccgaagagttttcttcacgtattcagaagcttgctgctacc
gagggtccggctgcagatcgtgaattgctgggtcagaagttgtggatgtcttaa
DBGET
integrated database retrieval system
