Cucumis sativus (cucumber): 101215720
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Entry
101215720 CDS
T02486
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101215720
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101215720
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
101215720
NCBI-ProteinID:
XP_004152608
UniProt:
A0A0A0LPL0
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Position
2:19725306..19730945
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AA seq
641 aa
AA seq
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MPPLGVQLFITERQVTMDNGIVQVTLSNPDGIVTGIRYGGVDNVLEVLNDESNRGYWDLV
WSSSSSTTGLFDVIKATGFEVIVENEEQVELSFTRTWDLSLEGKLVPLEIDKRFIMLRGS
SGFYSYAIYQHLEEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRA
LAYPEAVLLVDPIEPELQGEVDDKYQYSCDNKDSGVHGWISTDPAVGFWLISPSNEFRSG
GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSFDAL
QLWEDAKAQAVIEVQSWPYSFPASDDFPRSNQRSSISGKLLVKDSYVNEDLIPADGAFVG
LAPPGDVGSWQRESKGYQFWSRADESGNFSIDGVRPGDYNLYAWVPGFIGDYRYDALINL
TEGSEVDMGDITYEPPRQGATLWEIGIPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYG
LWERYSELFPDSDLVYTVGVSDYTKDWFFAQVPRKMENGTYKGTTWQVKFELDDVDNQAT
YKLRVALASVSLAELQVGVNEAKAKAVFSSGLIGRDNSIARHGIHGLYWVYNIDIPGNRL
VTGNNTIFFTQPRCTGPFQAIMYDYIRLEAPPPPSSAHPLE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgccgccactgggtgtgcagctctttattacagaacgtcaggtgacaatggacaatggc
atagttcaagtcacgttatcaaacccagatggcatagtaactggaattcgatacggtgga
gttgacaacgtgctcgaagtcctaaacgatgaatctaaccgagggtattgggacctcgtg
tggagctcatcatcgtccacaactggattgtttgatgtgataaaggctacaggtttcgag
gtcatagtggaaaatgaagaacaagtggaactctcctttacaagaacatgggatctgtct
ctcgagggaaaacttgtgcctttagagattgataaaaggtttataatgctccggggttcg
tctgggttctactcttacgctatttaccaacacctggaagaatggcctggtttcaacctt
ggtgaaactagactcgccttcaaactcagaaaagacaagttccactatatggccatggca
gacaacagacagaggtacatgccacttccagatgaccgttctccgcctagaggtcgtgcc
ctggcatatccagaggctgtcctgctcgtcgaccccatcgaacctgagctccagggagag
gtggatgacaaatatcagtactcatgcgacaacaaagacagcggcgtccatggatggata
tccaccgatccggcagtcggattctggctaatctccccgagcaatgagttccgatccggt
ggacccgttaaacagaacctaacttcacacgtcggcccaaccaccctagctgtttttata
agcgcacattacgcgggagaggatctggtgccgaaaatcggagccggcgaggcgtggaag
aaagttttcggtcctgtgttcatctatctcaactccacttatgattccttcgacgcactt
cagctctgggaagatgccaaagcacaggcagtgatcgaagtccagagttggccctacagc
ttccctgcttcggatgattttccaaggtcaaaccaacgtagtagtatcagtggtaaacta
ttagtcaaggatagctacgtcaatgaagacttgataccagcagacggtgcgtttgttggc
ctggctccaccaggagacgtaggatcatggcaacgagagagcaagggttaccaattttgg
agtagagcagatgaaagtggaaatttctccatcgatggcgtgaggccgggcgactacaat
ctgtatgcatgggtccccggttttattggagattatcgttatgatgctctcatcaacctt
acagaaggcagtgaggtggacatgggagacataacatacgaacctccgagacaaggagcc
acactatgggaaataggaatcccagatcgctccgcagcagagttctacgttccagatcca
aatcccaactacgtcaataagctctaccttaaccatcctgataagtttcggcagtatggc
ctatgggaaagatacagtgaattgtttcccgactcagatttggtatataccgttggcgtt
agtgactacaccaaggattggttctttgctcaggtccccaggaagatggaaaatgggaca
tataagggaacaacgtggcaagtgaagttcgagctagacgacgtggacaaccaagcaact
tacaagcttcgggttgcattggcctccgtttctctcgcagaattgcaggttggagttaac
gaggccaaagcaaaggcagtgttctcgagtggacttatcgggagggacaattcgattgca
agacacggcattcacggcctatattgggtttacaacattgacattcctggaaatcggctg
gtcaccggcaataacaccatcttcttcacccaacccagatgcacaggccctttccaagcg
attatgtacgattacattcgtctggaagctcctccacctccatcctccgcccatcctttg
gaataa
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