Cucumis sativus (cucumber): 101215744
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Entry
101215744 CDS
T02486
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101215744
09123 Folding, sorting and degradation
03018 RNA degradation
101215744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101215744
03041 Spliceosome [BR:
csv03041
]
101215744
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101215744
mRNA degradation factors
5'-3' decay
Lsm complex
101215744
Spliceosome [BR:
csv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101215744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
101215744
NCBI-ProteinID:
XP_011659113
UniProt:
A0A0A0K9I4
LinkDB
All DBs
Position
7:complement(13681106..13686011)
Genome browser
AA seq
149 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGVRPAKGMGRGFDD
GAKAASGGRGKGGPGGKPGANRVGGRGRG
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttccctcctaaagactgctcaaggacacccaatgttggtggaattaaaa
aatggtgaaacttacaacggccatttggttaattgtgacacatggatgaacattcatctt
cgggaagtcatctgtacttctaaagacggtgatcggttttggcgaatgcctgaatgttac
atccgtggtaatacaatcaagtatttgcgagttccagatgaggttattgacaaagttcag
gaagaaaccaaaagccgtgcagataggaaacctctgggtgtagggcgtggaagaggaaga
gggcgcgaggatggtcctggtgtcagaccagctaaaggaatggggcgaggctttgatgat
ggtgcaaaagctgcttctggcggccgtggaaagggtggccctggtgggaaacctggtgcc
aacagagttggaggcaggggacgaggttga
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