Cucumis sativus (cucumber): 101215903
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Entry
101215903 CDS
T02486
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101215903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csv04040
]
101215903
Ion channels [BR:
csv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101215903
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
TMEM95
Motif
Other DBs
NCBI-GeneID:
101215903
NCBI-ProteinID:
XP_011649574
LinkDB
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Position
1
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AA seq
774 aa
AA seq
DB search
MAAFEKDDIPMLSNTDPPMFDEQVDSYFPSYASLGRSSSLSIPENSSGMYGSEANLVGHT
GPLRIERSSFMVSGSKKTGSKPKKLSQSKPGVTESKTAEPLAEKFPSFKIVDESDWSIHN
YAGRNEHLIKSGQLGLCNDPFCITCPTYNSKASQQKSSRMSGIFDAKFHNDLYGGGKGWA
RKFQSFWCFLLSYIPGVMNPHAKVVQQWNKFFVISCLVAIFLDPLFFFLLSVQENNKCIV
IDWPLTTTLVVFRSMTDFIYFLHMLLQFRLAYVAPESRVVGAGELVDHPKKIAMNYLKGN
FFIDLLVVLPLPQIIIFLILPKSLGSSGANYAKNLLRTAVTVQYIPRLYRFLPLLAGQSP
SGFVFETAWANFVINLLTFMLAGHIVGSFWYLLGLQRVTRCFREACINTGNRSCLEYIDC
GHGDESRSQILDPHRDSWTHNVNATACFGSEGFDYGIYLQAVKLTTKNSIITRYTYSLFW
GFQQISTLAGNQVPSYYVYEVLFTMGIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRR
RDVEQWMEHRRLPEGLRRQVRQAERYNWASTRGVNEERIFENLPEDLQKNIRRHLFKFVN
KVRIFALMDYEPILDAIRERLRQKTYIEGSEVFSAGDIIEKMVFIVRGKMESRVDGNGIV
VPLSEGDVCGEELLTWCLEHSSLNKDMKRQQVPAPRLVSNRTVRCLSNVEAFSLRAVDLE
EVTSMFSRFLRNPRVQGAIRYESPYWRYLAAMRIQVAWRYRKRRLSRVQTSQSN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttgaaaaagacgatataccaatgctatcaaacactgatccaccaatgttt
gacgaacaagtggattcttattttccttcatatgcatccttgggccggagttcgtcacta
tcaattccagaaaattcttctgggatgtatggtagcgaagcaaatcttgttggtcatact
ggtcccctacggatagaaagaagttcattcatggtgagtggttcaaaaaaaactggcagt
aagcccaaaaaactttcacagtcaaagccaggagtgactgaaagcaagacagcagagccg
ctggcagaaaaatttccttcgttcaagattgtagatgagtctgattggtccattcataac
tatgccggtaggaacgaacacttaataaagtctggccagctgggattgtgtaatgatcct
ttctgtataacttgcccaacatataattccaaagcatcacaacagaaaagctcaagaatg
tcaggcatatttgatgccaagtttcataatgatctctatggaggagggaaaggatgggcg
aggaagtttcagtccttctggtgcttcttgctttcatatattcctggtgtaatgaatcct
catgcaaaagttgttcagcaatggaataagttttttgtcatatcttgcttggtggcaatc
ttcttggacccattgtttttcttcttgctgtctgttcaagagaataataagtgcattgtt
attgactggcctttgaccacaaccttggtggttttccggagcatgactgattttatctat
ttcctacacatgcttcttcagtttaggttggcctatgtagcaccagaatccagagtcgtt
ggtgctggcgaattggttgaccatccgaagaaaattgccatgaattacctcaaaggaaat
ttttttatagatttgcttgttgtcttgccgctgcctcagatcataatttttttaatcctg
ccaaagtctttgggatcatctggagcaaattatgccaaaaatctattacgcactgcagtt
actgttcaatatattcccagactgtataggtttctacctcttctcgctggccagtctcca
agtggctttgtatttgagacagcatgggcaaattttgtcatcaatcttttgacctttatg
ttggctggtcatattgttgggtctttctggtatcttctcgggcttcagagggtgactcga
tgttttcgagaagcttgcattaacactggaaataggagctgcttggaatatatagattgt
gggcatggggatgaatctaggagtcagattctggatccacatcgggattcatggacgcat
aatgtgaatgctacggcatgtttcggcagtgaaggtttcgattatggaatctaccttcaa
gctgtaaaacttaccacaaaaaatagtataatcacgagatatacatactcattattttgg
ggattccagcaaatcagtactctggcggggaaccaagttccaagctattatgtctatgaa
gtccttttcactatgggtattattgggcttggtctattgctgtttgctcttctcatcggg
aatatgcagaactttctccaggctcttggaagaaggaggttagaaatgtcactacgacgt
cgtgatgtcgagcaatggatggagcatcgtcgcttaccagaaggtttaagaaggcaagta
cgacaggctgaaagatacaactgggcttctacaagaggagtaaatgaagagagaattttt
gaaaatttgcctgaggacctacaaaaaaacataagacggcatctctttaaatttgtcaac
aaggttcgcatttttgctctgatggactatgaacctattttagacgcaatacgtgagaga
ctgcgacaaaagacatacatagaaggaagtgaagttttttctgctggagatatcattgag
aagatggttttcatcgtacgggggaaaatggagagccgtgtagatggaaatgggattgtg
gttcccttatctgaaggagatgtctgcggtgaggaacttctaacatggtgtcttgagcat
tcctccctaaacaaagatatgaagcggcagcaagttccagcgccgagattagtaagcaac
cggaccgtaagatgcttaagtaatgttgaagcattttctctccgggctgtagaccttgaa
gaagtgactagtatgttttctagattcttgcgaaacccgcgtgttcaaggagccataagg
tacgaatcaccctactggaggtatttagctgcaatgcgtattcaagtagcatggagatac
aggaaaaggcgtctatctcgagttcaaacctctcaatctaactaa
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