Cucumis sativus (cucumber): 101215906
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Entry
101215906 CDS
T02486
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03440
Homologous recombination
csv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101215906
03460 Fanconi anemia pathway
101215906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101215906
03036 Chromosome and associated proteins [BR:
csv03036
]
101215906
03400 DNA repair and recombination proteins [BR:
csv03400
]
101215906
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101215906
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101215906
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101215906
FA (Fanconi anemia) pathway
Downstream FA components
101215906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
101215906
NCBI-ProteinID:
XP_011651849
UniProt:
A0A0A0LCP6
LinkDB
All DBs
Position
3:28734945..28741581
Genome browser
AA seq
1108 aa
AA seq
DB search
MSSWQILSDSGNNFRWELSAQRLEVKSECEQNGSLSRSDSTNSVARLPSMADLLLCSRFM
QNSEDAGAGASMFRTGLGKSVSVKQSSIDKALSLLSDDKAPDIGRLHNGGNFSNSLFQTG
SGKSVNVSSEGLLRAKTLLGLEEDDTCSSFQRFGQAISPYDVKGEFLESKGVCGMENMSG
ASVSISPLVFNTCFSRSSSENQASPSFRQIELPNKAPKAPPIKFHTAGGRSLSVSSDALQ
RARSLLGDPELGSFLDDGDSDCYKRNMGDATPSNGEHIFHTPSFNKVESTTKHTSKSFVS
PLRPSSRVMQSSLKSKSILGSNLMKKFDAAEEESISRFDDNKSCLAETIGSQPNEPCTIV
ENALENGIRSGIHLAERSFGEPLNDISNIVDSRSRSDRASNNEKRKLWGTSSISPFKRPR
NSKFSTPFNKNASLVTTSLSTSSSNNFSCKRRVSTRYPHQTSRMYMKEYFGRPSSNHDKL
DYLSDEVRRIKAENAEKYKVPDNSGTNCIGVEAFRHMLTDSGASPQHVSELWVTNHYKWI
VWKLACYERQSLVKSNRNFLGVSNVLEELKYRYEREVNQGHRSAIKRILEGDAPPSMLLT
LCISAIRSKCKSRAQVCSSMISESNYGEGAKVELTDGWYSIDALLDGPLSKQLLMGKLFV
GQKLRIWGARLCGWIGPVSPLEMPETVNLMLHINGTFRAHWADRLGFCKNAGVPLSFKCI
KSSGGPIPWTLVGVSRKYPVLYKERLSDGASIVRTERIEMKIRQLYEQRRTAIIDGIVSE
FQRGTKSNIYNESDSEEGAKLFKILETAAEPELLMAEMSPEQLTSFASYQAKIEAIRQSD
MEKSIERALADAGLSGRDVTPFMRVRVVGLTSKSSQRKTHGKEGLITIWNPSEKQQLELV
EGQAYAIGGLVPINCDADILYLQTKGSTTKWQSLSPQSMKCFEPFYKPRKSVLLSNLGEV
PLSSEFDVVAIIVHVGEVFATAQQKKQWIFVVDGFVSESHSEGISNSLLAISFCSQYADD
DSFVPMNSNLTGSTAGFCNLIKRPKDQINHLWVAEATENTSYFLNFDSTDCSHMKNAAVF
AKRWAENSTSIIKNLREKILFMIDDHKD
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttggcagattttatccgattccggcaacaattttcggtgggaactttctgct
cagcgtctcgaagtcaaatccgaatgcgaacaaaatggttctctttctcgaagtgacagc
accaactccgtcgcccgtctcccatccatggctgacctcttgctttgctcaaggttcatg
caaaattccgaggatgcaggtgcgggcgcttcgatgtttcgaaccggattgggaaaatca
gtttctgtaaaacagtcttcaatcgataaggctttgtctctgctctccgatgataaagct
ccagatataggtcgattgcataatggaggtaatttctccaattctctctttcaaacgggc
tctgggaaatcggtcaacgtatcttctgaaggtcttctcagagccaagacattgttggga
ctggaagaagatgatacatgttccagttttcaaagattcggacaagccatcagcccatac
gatgtgaaaggggaatttttggaatcaaaaggtgtgtgtggtatggagaacatgagcggt
gcatcagtttcaatctctccattggtctttaatacttgcttttcaagaagttcatcagag
aatcaagctagcccgtcattcagacaaattgaattgcctaataaggctcccaaggctcct
ccaataaagtttcacacagctgggggtagatccttatctgtttcaagtgatgcactacaa
cgtgcaagaagtctccttggtgacccagagttgggaagtttcttggatgatggggacagt
gattgctataagaggaatatgggagatgcaacaccgtcaaatggggaacatatttttcac
actccttcattcaacaaggtagagtcaactactaaacacacatccaaaagctttgtttcc
ccattaagaccatcttcaagagttatgcaatcttcattgaagtcaaaaagtatattaggt
agtaatttgatgaagaaatttgatgcagccgaagaagaaagtattagtaggtttgacgac
aataaatcctgtttggcagaaactattggcagccagcctaatgagccatgtactatagtg
gagaatgctcttgaaaatggaattagatcagggattcatttggctgaacggtcatttggt
gagccactgaatgacatttcgaatattgtcgactcaagaagtagaagtgatagagctagt
aataacgagaagaggaagctttggggtacaagttccatatctccattcaaaaggcctcgg
aattccaagttttccactccctttaataagaatgcatcacttgtgactacaagtttatca
acttcatcgtctaataacttcagttgcaaaagaagggtttccactcggtatccacatcaa
acttcaaggatgtatatgaaggagtattttggaagaccttcatcaaaccatgacaagttg
gattacttgtcagacgaagtcagaagaatcaaagcagaaaatgcagagaaatataaagtt
cctgacaactctggcacaaattgtattggagtagaagcttttcgtcatatgttaaccgac
tctggagcttccccacaacatgtttctgaattgtgggttacaaatcactacaagtggatt
gtttggaaactggcctgctatgagaggcagagtctggtcaaatcaaatagaaattttttg
ggagtttccaatgttctcgaggaattgaaatataggtatgaaagagaagttaatcaaggc
caccgttctgcaataaagagaatactggaaggagatgcaccaccatctatgttgttaact
ttatgtatttcagctattcgctcaaaatgcaaatcaagggcccaagtctgttcatccatg
atcagcgagtctaattatggtgaaggggcaaaagttgaattgactgatggatggtattcc
attgatgctcttttggatgggccactgtcaaagcaacttcttatgggaaaactgtttgtg
ggacagaaacttcggatatggggagcaagattatgtggttggatcgggcctgtttcacct
cttgagatgccagagactgttaatttgatgttgcacataaatggaacttttagagctcat
tgggcagatagactgggattctgcaaaaatgctggtgtcccattatcctttaagtgcatc
aagagcagtgggggtccaattccttggacattggttggagtctcacggaaataccccgtt
ctttataaggagaggttaagtgatggggcatccatagtaagaactgagcggattgagatg
aagatcagacaattatatgagcagaggcgcacagctataatagatggtattgtttctgaa
ttccagagagggacaaagagtaatatctacaatgagagtgatagtgaagaaggggcaaaa
ctctttaagatccttgagacagcggctgaacctgaacttttgatggcagagatgagtcct
gaacagttgacttcttttgcgagctaccaagctaaaatagaggcaatcaggcaatcggac
atggaaaaatcgattgagagagcattggcagatgctgggttaagtggtagagatgtcact
ccatttatgagagttagagtggttggacttacaagcaaaagcagccaaagaaaaactcat
gggaaggagggcttgattacaatctggaatccatcagaaaagcagcaactcgagctggtt
gaggggcaggcatatgctattggaggacttgtgccaataaattgtgatgcggatattctt
tacttgcaaacaaaaggatcaaccaccaaatggcagtccttatctccccagtccatgaaa
tgctttgagcccttttataaaccccggaaatctgttttgttatcaaatttgggggaagtt
cctctatccagtgaatttgatgttgttgcaattattgtacatgtgggggaggtttttgct
actgctcaacagaagaaacagtggatatttgtggtagatggttttgtatctgagtcacat
tcagaaggcatatccaattcgctccttgctattagtttctgctcacagtatgcggatgat
gattcatttgtgccaatgaacagcaatcttaccggttccaccgcaggtttctgcaatctt
ataaagagaccaaaggaccaaataaatcatctctgggtagcagaagcaacggagaatact
tcgtactttttgaattttgattctacggattgttctcacatgaaaaatgctgcagttttc
gctaaaagatgggcagagaattctacctcaattattaagaatctcagggagaagatttta
tttatgattgatgatcataaagactag
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