KEGG   Cucumis sativus (cucumber): 101216050
Entry
101216050         CDS       T02486                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5 isoform X2
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csv03041]
    101216050
Spliceosome [BR:csv03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101216050
 Complex B
    101216050
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4
Other DBs
NCBI-GeneID: 101216050
NCBI-ProteinID: XP_004134259
LinkDB
Position
3:5790431..5798647
AA seq 867 aa
MEELELIGEEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQEEEVRLNDPEE
QRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPR
EAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKSFEDAHRPTSNP
LPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIH
FYPEKSCTLLIKNMYNGPGLAWEQDEGLEFTDEEVERCYEEFYDDVHTEFLKYGEIVNFK
VCKNGSFHLRGNLYVHYKSVDSAVLAYNANNGRFYAGKQIICEFINVTRWKIAICGEFMK
TRYKTCSHGTACNFIHCFRNPGGDYEWADSDKSPPRYWLKKMTSLFGYLDEYENETHSEL
EHWNKFGKSSKSMTIDVDSYRSRRSKSRSLDHGSRRSDNNENDYRWIRHSRREKVHEKQQ
SLDKEEYEKKKYDQQKKNRSNDTDSDESVDKFGERSKDRNRSREKEKYDRWRKNRSNDTD
SDESVDEFEERSKDRDRSRRSSRRPRKQESNWKTDGRNVDRDDNKNAANETDEDWSSGDG
DKDGHQHKRRKSNSRASETSRSTDVYPSNSVIKDRDTHEVSSERNKERRLTYGGKPKKHW
DEVTKDSDDHLEKKSNLKTDYESKKPSAGKSSSHYFESSSRDVNTEDGYSIDSLHNDVLD
ERWEPSFSDRCIERFKPLDPDKEHCNEHSDKEGRWDPERSYDKFEKCRETASAMCCESGS
SVSQIERSKSDVLGALNNPVHKVNKRNRRKLGSNNSYEHQKSRRKSSRHDDDQDFSDLKS
EKTNSEDGYLPKSHDKEAQTWPRGGNH
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggaggaacttgaactcataggagaagaagaagaagaagttaagccatgttcggtggag
aatctatgcaggaaggagaagaggaaagcgttgaagaagattaaacggaagcaattaaga
aaagagttggcgctaaaaaggctacaggaagaggaggttcggttgaacgaccctgaagag
cagagaaggattcagttgatggagctggaggaggaggagaggtcggagagggagaggaag
ctctttgaggagcgtgaaagggcttggatggaagctatggagttgaagaagaagaagatg
gctgaggaggaagaagaagagcagcaaaggagagcgctggaagaagaatcgacgccgcgg
gaggctgaaaatgaaaacgagtttaatgaggaagatggttgggaatacatagaagggcct
gcagaaatcatttggaaaggagaagagataattttgaagaagaaactaatcaaggttcct
aagaagagtgttgaacctgagaaaagctttgaggatgctcatagacctacatcaaatcct
cttcctccacaatctgaagcttttacagattataagaatactcccatttcaactaaacaa
gtgattgaggatgttgcaagccaagtgccaaactttggaacggaacaggataaatcacat
tgtccgttccatcttaaaactggagcttgtcgatttggtcaacgttgtagcagaattcac
ttctaccctgaaaaatcgtgtacattgcttatcaagaacatgtataatggtccaggcctt
gcttgggagcaagacgaggggctggagtttacagatgaggaagttgaacgctgctatgaa
gaattttatgacgatgtgcatactgagtttttgaagtacggggaaattgttaatttcaag
gtgtgtaaaaatggttcttttcacttaagggggaacctttatgtgcactataagtcagtg
gattcagctgtgcttgcttataatgccaacaatggccgtttctatgcagggaaacagata
atatgtgaattcataaatgttaccagatggaagatcgctatatgtggggaatttatgaag
acaaggtacaagacatgttctcatggaaccgcttgtaatttcattcattgttttcgaaat
cctggtggggattatgaatgggctgacagtgacaaatcacccccacgatattggttgaaa
aagatgacttctctgtttggttatttagatgaatatgagaatgaaacacattcagagctt
gaacactggaacaagtttggaaaatctagcaagtcaatgacaatagatgtcgacagttat
cgttcaagaagatctaaatctagaagtctggatcatggctctagaagaagtgacaacaac
gaaaatgactatagatggatcaggcactctcgtagggaaaaagttcatgagaagcagcaa
agtttggacaaagaggaatatgagaagaaaaaatatgaccaacagaaaaaaaacagatct
aatgatacagattctgatgaatctgtggataagtttggagagagaagcaaagatagaaat
cgtagtagggagaaggaaaagtatgatcgatggcgaaaaaacagatctaatgatacagat
tctgacgaatcagtggatgagtttgaagagagaagcaaagatagagaccgtagtaggaga
tcatcaagacggcctagaaagcaggagagcaactggaaaactgatggtcgaaatgtagat
cgtgatgacaataagaatgcagcaaatgaaactgatgaagactggtcaagtggtgatggg
gacaaagatggacatcaacacaaaagaaggaaaagcaatagtcgtgcttctgagacttct
agaagcacagatgtttatccaagcaacagcgtaattaaggatcgtgatacacatgaagtt
tcttctgaaagaaacaaggaaaggcgtcttacatatggtgggaaacccaagaaacactgg
gatgaggttaccaaagactcagacgaccatttggaaaagaagtctaacttgaagactgat
tacgaaagcaagaagcccagcgccggaaagtccagtagtcattactttgaatcaagttct
agggacgtgaacacagaggacggttacagcattgattccttacataatgatgtattagat
gagcgttgggagccgtctttttcagatagatgtattgagagattcaaaccattggatcct
gacaaagaacattgtaacgagcacagcgacaaggaagggcgatgggatcctgaaagaagt
tatgataaatttgagaaatgtagggagactgcaagtgccatgtgctgtgaatctggcagc
tctgtttcccaaattgaaagaagtaaatcagatgttctaggtgcattgaataatcctgtt
cacaaagttaacaagcgaaatcgtaggaaacttggaagtaataattcatatgaacaccaa
aaatctcgaagaaagtcttctcggcacgacgatgatcaggatttcagtgatttaaaatct
gagaaaacgaattctgaggatggttatcttcctaaaagtcatgacaaagaggcacagaca
tggccaagaggaggaaaccactag

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