Cucumis sativus (cucumber): 101216060
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Entry
101216060 CDS
T02486
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101216060
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
90S particles
Other 90S particles
101216060
Pre-60S particles
Other pre-60S particles
101216060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
101216060
NCBI-ProteinID:
XP_004136785
UniProt:
A0A0A0LHL3
LinkDB
All DBs
Position
3:33336042..33351119
Genome browser
AA seq
1149 aa
AA seq
DB search
MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVPPGGISAPNASE
AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTSTPVDGPGEDKQSHAQH
LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP
ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL
TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDLHLEDCNLENIEVQAIKSTCAICEDV
LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDNLQNCIGS
AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE
SCKVKKIAACKNLRTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA
AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL
KDAIGCLASIMDSRVTKKVFMSLLERFQFLNTKDEFEEREANADESAQNAEGKSRTRERC
VMLELAAAIVRGADEDLIDLIYKFVKFSFQGSLGSDHHEVYQTLSRILEEHAWFASSRFP
ELVDMLIDLQSPVDTSSQRSRFGCFHILLVHSLKVSSAEESNKAFLMLNEIIITLKSAEE
DSRKAAYDILHCISCSLKDLSHTNSDAHKKFVAMIMGYLSGASPHVKSGAISAVSVLIYE
DADICLSIPDLVPSILSLLRGKAIEVIKAVLGFVKVLVSSLQAKHLQSIISDILTAALPW
SSVSRHHFRSKVTVILEILIRKCGYAAIEGFTPENYKGFIKPFGEKRLNKTSSKDVGDAN
TDVADLSTNGVRDKQQDGLDSLPKKNESGHHRKRKWEKPSGFIRSKTDNASAEDGSRFKM
RKRAATSSSKRSSMVDGRGDGRRTKFSRRGDPRKEGKGGIKHGNRHQKERFGVRRPFKAS
KSNHNNSSS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccatgtcagaaggcaatcagcagctacaagaatcggaaaaagacgatgctgaa
gctgtagttctcaccgatgctacagacatatgcgcccaactcatggaacgctatgccaag
tcctccgctccccaacaccgtcatctcctcgcttccgccgtcgccatgcgctccattctc
cactctgagtccctccccctcacccctgccgcatacttcgccgccgctatttctgccatt
gataatgcttccgcttccgacaccttggaccccactgccttgtctgccttgttgtctttt
ttagccattgcgctcccattggtcccccctgggggaatttctgctccaaatgcgagcgaa
gcggcgggtgtgctggtggttctattggggatgaaaaacttgactgtttccactgtgagg
gctgcggtgaagtgcttggggattttgttaggattttgtaatttggaggattgggcatcg
gtagagctgggatttgatactctgttgaagttttcggttgaccggcgtcctaaggttcga
cgttgtgctcaagaatctcttattacgtttttgaactctttaaagcattctgctattaag
aaacaggccagcagtttggttttttctctcctgaaaagctgtatgccctcggcagttaaa
ttaagtaccagcactcctgttgatgggcctggggaagataagcaatcgcatgctcaacat
cttgatgtcttgcacaaactgaatgttatcattcttactattccattactatcaaaaaga
gttcgttttaaaatgcttaaagaattaattaaacttgtaagtccacagttttctatagtt
acagcgcatagtttcaaagccatgaaacttattcttaaatcttcaaaaactggagttcct
gctttggaggttgagagcattattgttgcaattggctcatacctttcttcgggtgataag
aaccccttggacacggtgctttctgctatcaccctattgaaatgtgccatggatgctgga
ggttcaagtgtagcgaaaaaaaatcttccagtagtttgtggttatatggcaggtcttttg
acttctgatgtgagtaaggctgtacatgcttctagtgtagtgaaagagttaatacaggat
tatgtagatcaggaatgcttgatagccctgattgataaagatttacatctagaagactgc
aacctggagaacattgaagtacaggccattaaatcaacgtgtgccatttgtgaggatgtc
cttaatagttgtgatggagatcttgggaaatatattttggatgtcatatctgctttgttt
ctcaaattaggaacaacttctatcatctatatgaaacatattttgctcaagcttgctgat
ttgatgaatatcgcggggaatctatcaaacattgataatcttcagaactgtattggatct
gctgtaactgctatgggacctgagaagatacttactcttattcccatatccattaatcct
ggcgactcaactgtgcagaacatgtggttgataccagttctacatagtcatgttgttgga
gcatcacttgggtattatctagaatatattgtgccccttgcaaaatcttttcaggacgag
agttgtaaagttaagaagattgcagcgtgtaaaaatctacggacatgtgctcgtaatttg
tggaaattactacctgctttttgccgccatcctagtgatatgcaccgaagaatgggaatg
ctttctgaacttctaattacacttcttaaagaagactcctttatgcatgaagatattgct
gctgccttacaggtccttgtgaatcagaatgcagttgtaccgaattgcaatgatgtatct
gtttattcaaagaaaatgcagagcaagaacatgaaggcgttggtatcatgttcaactaat
ttgcttcaggctctcgcggagttatttgttgattccataccaacgaagcgctcacatttg
aaggatgccattggatgcttggcttctatcatggactccagggtgaccaaaaaggttttt
atgtcacttcttgagaggtttcagtttctaaatactaaggatgagtttgaggagcgagaa
gccaatgctgatgaatcagctcagaatgctgaaggaaagtctaggaccagagagagatgt
gtaatgctggagctagctgcagctatcgtcaggggagctgatgaggatttaattgatcta
atttataaatttgttaagttttcttttcagggatctttagggtcggaccatcatgaagtg
tatcaaactctgagcagaattttggaggaacatgcttggtttgcttcttctagatttcct
gaactggtagatatgttaattgatctgcaatcccctgttgatacttcttctcaaagaagt
cggtttggttgcttccacattcttctggttcattcattgaaggttagctcggcagaggag
agcaacaaggcttttcttatgctcaacgagatcatcatcacattaaaaagtgcagaggaa
gacagcaggaaagcagcttatgacattcttcattgtatcagttgcagcctaaaagatttg
tcgcatacaaattctgatgcacataaaaaatttgtggccatgataatgggctatctgtct
ggtgcatctcctcatgtaaaaagtggagcaatctctgcagtctcagtgttgatttatgaa
gacgcagatatatgtctttcaatacctgatcttgtgccctccatcttatctttgctacga
ggaaaggctatagaagttataaaagcagtgctggggttcgtgaaagttttagtgtcttcc
ttgcaagctaagcatcttcagagcatcatttctgatattcttacggcggctttaccttgg
tcgtctgtctcaaggcatcattttagatccaaggtcacagtgattttggagattctcatt
cgaaaatgtggttatgctgcaattgagggctttactcctgaaaattacaagggtttcatc
aaaccttttggggagaaacgccttaacaagaccagttccaaggatgttggtgatgccaat
acagatgttgcagatttatccactaacggggtgagggataagcaacaggacgggctggac
tctcttcccaagaaaaatgaatcgggtcatcacaggaaaaggaagtgggaaaaaccttcc
ggtttcatcaggagcaaaactgataatgcatccgctgaggatggtagtagatttaagatg
agaaaaagagctgcgacctccagtagtaagaggagttcaatggtggacggtcgaggagat
ggtcggagaacaaaattttcaagacgtggggatcctagaaaggaaggaaagggagggatc
aaacacggaaacagacatcagaaagaaagatttggagttcgtaggccttttaaagcttca
aaatctaatcacaataactcctctagttga
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