KEGG   Cucumis sativus (cucumber): 101216112
Entry
101216112         CDS       T02486                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1b
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101216112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csv03041]
    101216112
   03032 DNA replication proteins [BR:csv03032]
    101216112
Spliceosome [BR:csv03041]
 Complex A
  U1 snRNP components
   Sm proteins
    101216112
  U2 snRNP components
    101216112
 Complex B
  U1 snRNP components
    101216112
  U4/U6.U5 tri-snRNP components
    101216112
 Complex C
  U2 snRNP components
    101216112
DNA replication proteins [BR:csv03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     101216112
SSDB
Motif
Pfam: LSM WHD_ArnR1 Gemin7 EBNA2_Core YomU_Tube
Other DBs
NCBI-GeneID: 101216112
NCBI-ProteinID: XP_004150106
UniProt: A0A0A0LD16
LinkDB
Position
3
AA seq 114 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPLGRGRGRGRGRGRGRGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgaagcttgttaggtttttgatgaagctcaacaatgagactgtctctatcgagctcaaa
aatggaactgttgtccatggaaccatcacaggtgtggatatcagcatgaatacgcatttg
aaggctgtgaagctaactctaaagggaaaaaatccagttaccatggatcatttaagtgtg
agaggtaacaacatcagatattatatcctacctgacagcttgaatcttgaaactttactt
gttgaagagacacccagggtcaagcccaagaaaccaactgcagggaggcctttggggcgg
ggacgagggcgcggccgtggacgtggtcgtggacgtggacgctag

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