KEGG   Cucumis sativus (cucumber): 101216163
Entry
101216163         CDS       T02486                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    101216163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csv03400]
    101216163
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     101216163
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 101216163
NCBI-ProteinID: XP_004141182
LinkDB
Position
3:complement(34301419..34310937)
AA seq 1541 aa
MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFIKAMRDDRGEMVRNAHLLGFFR
RICKLLFLRTKPVFVFDGATPALKRRTLIARRRQRENAQAKVRKTAEKLLLNHIKVMRLK
ELAEDLQNQKQQRKQNLPKKSTLPSHKEKFDGTSTSERLGASIMAEEKGIFLSSASSFAG
ATHDKEDSDEQSTVNQKYNKDSKGKELLSDETHVVGSDSERMDLASRSAHQQNLDEMLAA
SIAAEEARSLNEKASTSAVTNLDGEDTDDEDEEFILPEMHGVVDPSVLAALPPSVQLDLL
VQMRERLMAENRQKYQRVKKDPAKFSELQIQAYLKTVAFRRDIDQVQKAAAGRGVGGVQT
SRIASEANREFIFSSSFTGDKQALASGRAEKNGDKDLQAPIVQQPLSSLKGTEIPSTSNS
LARSTPDKSEVYEENIETFLDERGRVRVSRVRAMGMHMTRDLERNLDLMKEIEKNTSAKK
ATNPDFMQNIQICDQQSFSFQSQVLDTSDEGVGGSINKLDERGTGSMLNEETAIEILLED
EGGKSFDGDDDLFSNLVAENPIGMASFDISTQKLSLDSREEALDGKTYSPKTVGVDDHSF
KEGTISDESEVDWEDGVCDLVNPVPFEADLAKSVSKGSLEEEADLQEAIRRSLEDKGYTK
TGPLSSDHQQPQPVIVGKKAEHYTSALKENMIGLGKLDSDDGMSSLNFNDSSGTKGTTES
LSQKMQCSEPVVLLDTQTHTLSKQLDASYNDATFSPKELNENNDTLEPLSEEASGAVQVG
DMINNTVVNSPCHMVEMEGFYTPGNVSSPKSFACDNHLKQNLPVNKHSNDVLLDAKDAKI
PTVGKISSAEITEDELIHRISVLEQERLNLGDEQKRLERNAESVNSEMFAECQELLQMFG
LPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDI
EHELGLNRDKLIQMALLLGSDYTEGVSGIGIVNAVEVMNAFPEEDGLHKFKEWIESPDPS
ILGPLGAKTGLNAHKRGSKASENDTTCSNSSGSASEENISKDLKENMAVKQSFMNKHRNV
SKNWHIPSEFPSETVISAYICPQVDKSAEPFSWGKPDHFVLRRLCWEKFGWENSKADELL
LPVLNEYSKHETQLRLEAFYTFNERFAKIRSKRIKKAVKSITGSRSAVLMDDAVRDASVN
NQRELSVEPKENISEKCSSEIQGACSNEEDRENRLQKPSRKRQLDGEQSQFGKGKKLRKK
EKGKRSVSEGSHSKRGRGRGRLASRGKTPMTDLAETSSSDDDGEFDNQKFDLENLQEPQE
RRRSSRIRKSASYAIDDADQPSDHSADRFSNDKVEKDVVVQDQYTYPKTIISQSQNTESS
SRTPKQSLQNDYLETGGGFCLVEDEKSRQEMCQNKDSAMEANNSEDYLTIGGGFCLDDND
ECVDPVAHSDQATILEAQKDDFENDLIPDQSTFSTEEHIVEKDTDARIESLHGLGNSNPV
SNRNSSQVGENVEEEPKDRSVRALGGGLSAMPNLRRKRRKY
NT seq 4626 nt   +upstreamnt  +downstreamnt
atgggagttcagggtctttgggagctcttggcccccgtcggccgccgtgtctccgtcgaa
accctagccgggaaaaagctcgccatcgatgcgagcatttggatggtacaattcataaaa
gctatgcgcgatgataggggagaaatggtccgaaacgctcatttactcggtttctttcga
cggatttgtaaactgttattcttgcggaccaagcctgtttttgtcttcgatggtgcaacc
ccagctctcaagcgccgtactctcattgctcgccgtaggcagcgtgagaacgcccaggct
aaagttcgtaagaccgccgagaaattgcttctcaatcatatcaaggtaatgaggttaaaa
gaacttgctgaggatctacagaaccagaaacagcagaggaagcaaaatctaccaaaaaag
agtaccttgccaagccataaggaaaaatttgatggtacttcgacttctgaaaggttggga
gcatcaattatggctgaggagaaagggattttcttgagcagcgcttcctcttttgctggt
gctactcatgataaagaggacagtgatgaacagtcaactgtgaaccagaagtacaacaag
gactcaaagggcaaggagcttttgtcagatgaaactcatgtagtggggagtgattcagaa
aggatggacttggcctcaagaagtgcccatcagcaaaatttagatgagatgttggcggca
tcgattgcagcagaagaagcaagaagtttgaatgaaaaggcatcgacatctgctgttaca
aatctggatggtgaagatacagatgacgaagatgaggagttcattttgcctgaaatgcat
ggggtagttgatccttctgtgttggccgctttgccaccttcagttcaacttgatcttctt
gttcagatgagagagagattaatggcagaaaacagacagaaatatcaaagggtcaagaag
gaccctgcaaagttttctgagctacagatacaggcatatcttaaaactgttgcttttcga
cgagatattgatcaagtgcagaaggctgctgctgggagaggggttggtggtgtacaaaca
tcaagaattgcctcggaagcaaacagggaatttattttttcatcatcttttacgggtgat
aaacaggctcttgcgtctggtagagctgagaagaatggagacaaagatctacaggcacca
atagttcagcaacctttaagttccctgaaaggtacagaaattcctagtacatccaattct
ctggctcgatcaacccctgataagtcagaagtttatgaggaaaacattgaaacatttttg
gatgagaggggacgtgtgcgagttagtagggtcagggcaatggggatgcacatgacacgt
gatttagaaaggaacttggatttgatgaaagagattgagaagaataccagtgcaaagaag
gctacaaatcccgactttatgcaaaatattcaaatatgtgatcaacaaagcttttctttt
caaagccaagttctagatacttcagatgaaggtgttggtggatccattaataagttggat
gagagaggtacagggtccatgctgaatgaagaaactgctatagaaatattgctggaagat
gagggtgggaagtcttttgatggtgatgatgatctattttctaatttagtggcagaaaat
cccatcggaatggcttcttttgatatctcgacccaaaaactctctcttgatagtagggag
gaagcacttgatggaaaaacttatagtccaaaaactgttggagtggatgatcactccttc
aaggaaggaaccattagtgatgagagtgaagtagattgggaggatggagtttgtgatctt
gtaaacccagttccttttgaagctgatttggcaaagtcagtttctaaaggttctttggaa
gaagaagctgacttgcaggaggcaataagaagaagtttggaggacaaaggatatacaaaa
actgggcctttatcttctgatcatcagcaaccacaaccggtgattgtcggaaaaaaggct
gaacattatacgagtgccctaaaagagaatatgattggacttggtaagctagatagtgat
gatggaatgagttctttaaattttaatgattcttccgggacaaagggaacgactgagagt
ttatctcaaaaaatgcaatgctcagaacctgttgtgttgttggatacacaaacccacaca
ctttccaaacagttggatgcttcttataatgatgctacattttctcctaaagagttaaat
gaaaataatgatactcttgagcccttatctgaagaagcatctggtgcagtccaagttggg
gacatgataaataatactgtggttaattctccgtgtcatatggttgagatggaaggcttt
tacactcctgggaatgtttcatccccaaaatcttttgcctgtgataaccatttgaagcaa
aatcttcctgttaacaagcatagtaatgatgttttgttggacgcgaaggatgcaaaaata
cctactgttggaaaaataagtagtgcagagattacagaggatgagttgatacatagaatt
tcagttctggagcaagaacgtctgaatcttggagatgagcagaaaagacttgagcgtaat
gctgaatctgtcaatagtgaaatgtttgcagaatgtcaggaattactgcaaatgttcggc
ttaccatatattattgctcctatggaagcggaagctcagtgtgcttatatggaacttgca
aatcttgttgatggggtggtgactgatgactctgacgtcttcctgtttggggcaagaagt
gtttacaagaatatatttgatgaccgcaaatatgttgagacatattttatgaaggacatt
gaacatgagcttggtctgaaccgggacaagttaattcaaatggcactactacttgggagt
gattatacagaaggggttagtgggattggcattgttaatgctgttgaggttatgaatgca
tttccggaggaagatgggctccataaattcaaagaatggattgaatcaccagatccaagc
atcttagggccgcttggtgcaaaaacagggttaaatgcacataaaagagggtcaaaagca
agtgagaatgacacgacttgctcaaatagcagtggttctgcatctgaagagaacatatct
aaagatctgaaggaaaacatggctgttaaacagagtttcatgaataagcatagaaatgtt
agcaagaactggcatataccttctgaatttccaagtgaaacagtcatttctgcttacatc
tgcccacaagtggacaagtcagcggaacctttctcctgggggaagccagaccattttgtc
cttcgcagattatgctgggaaaagtttggttgggagaactcgaaggcagatgaattgctt
ttgccagtcctgaacgagtacagcaaacatgagactcaacttcgattggaggcgttttac
actttcaatgaacggtttgctaaaatccgcagtaagagaataaaaaaagctgttaaaagt
attactgggagcaggtctgccgtgttgatggatgatgctgtgcgggatgcttctgtaaat
aatcaaagagagctttctgttgagcctaaggagaacatatctgagaaatgctcatcagaa
atacaaggtgcatgttcgaatgaagaggacagagaaaatagactccaaaaaccttccagg
aaaaggcagctagatggagagcaatctcaatttggtaagggtaaaaaactaagaaagaaa
gaaaaaggaaagagaagtgtaagtgagggatcacattccaagagagggagggggagaggc
cggttggcatcgagaggaaagactcctatgactgacttggctgaaaccagctccagtgat
gatgacggtgaatttgacaatcagaaatttgatttggagaatttgcaggagcctcaagaa
aggagacgatcatcacgtatccgaaaatctgcaagctatgcaattgatgatgcagatcaa
ccatcagatcacagtgcggatagattttccaatgataaagttgaaaaagatgtggtggtc
caggatcagtacacttatcccaaaactattataagccaatctcaaaatacagaatccagt
tccagaactcccaagcaatctctacagaatgattatctcgaaactggaggtggtttctgt
ctggtggaagatgaaaagagccggcaagaaatgtgccagaacaaagattcagctatggag
gctaacaatagtgaagactacctgacaataggaggcgggttttgcttagatgacaatgat
gaatgtgttgacccagttgcacactccgaccaagcaaccatattagaagcccagaaggat
gactttgaaaatgatcttattcctgatcaatcaaccttctctactgaggaacatatagtt
gagaaagatacagacgcacgtatagagtctctgcacggtttgggcaactcgaatcctgta
agtaatcgaaactcttcccaggtaggtgagaatgtggaagaggaacctaaggatcgtagt
gtaagggcattgggaggaggtttaagtgccatgccaaatttgagaagaaagagaaggaag
tattga

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