Cucumis sativus (cucumber): 101216195
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Entry
101216195 CDS
T02486
Name
(RefSeq) vacuolar sorting protein 3
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101216195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101216195
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101216195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
CNH
Vps39_1
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
101216195
NCBI-ProteinID:
XP_011660326
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All DBs
Position
1:complement(32712849..32747724)
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AA seq
1011 aa
AA seq
DB search
MAKPERAVLEPLGEEFDISTHFRTSIRSLAVSPVSDSETLIYAGTKSGALVLFSVTPKYS
SSTALDSETASLDTPRITSPSEGLSLLRTVAVSVSSIVCLHVLRGIGKVLVLCSDGFLYI
VDSLLSLPVKRLAGLKGVSLIAKRIRSSESEFSSLYGSVDNNSGFVSPSQRLLQRLGSGM
RTNGLKIKESESPREESDFVFAALVGKRLILFEVVLGHRTGRSDRNTNDPIESLLILKEL
QCKEGFSTMVWLNDSIIVGTASGYYLFSCVTGESSLIFKLPELSSPPCLKLLRKECKVLL
LVDRVGITVNAYGQPMGGSLVFHDIPKSVAEISTYVVVASSGQLKLYHRNTGSCIQTITF
NGNRTEPCIVSDEEDGSGDVIAVAVTNKVMCYQKLPCDEQIKDLLRRKNFKEAISLAEDL
ECAGEMSKEMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVMKDPNRWSLL
IPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNDDFLLNPPSRSDLLESA
VKHIIRYLEASRDKELISAVREGVDTLLMCLYRTLNSVDKMEKLASSENSCVVEELETLL
EDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLMDSSMDESTMDSNVRDISGKEV
AAAEASKILEESSDQALVLQHLGWIADINQHFAIQILTSEKRQSQLSPDEIIRAIDSKKV
EMLQRYIQWLIEEQESCDPHFHSLYALSLAKSAVEHDSTQSLDSSSDPKISDQRLNSIFE
QPIRERLQIFLQSSDLYDPEEVLHLIEGSELWLEKAILYRKLGQEALVLRILALKLEDSE
AAEQYCAEIGRSDAYVQLLDMYLDPQNGKEPMFKAAVRLLHNHGESLDPFRVLETLSPNM
PLHIASETILKLLRARFHHKCQGQIVHNTSRALDLEARLARLEERSRHAQINDESLCDSC
HARLGTKLFAMYPDDTVVCYKCYRRQGESTSVTGRNFKQDILIKPGWLVMD
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccgaaagggctgttcttgaaccactcggtgaggagttcgatatatccact
cattttcgcacttcaattagatctctcgccgtctcccccgtctctgattccgagacctta
atatacgccggaactaaatctggggcacttgtcttgttctctgtaactccgaaatattca
agttctaccgctctagattccgaaactgccagcttggatactcccagaattacctctcca
tcggagggactttcacttctgaggactgttgcggttagcgtttcctcaattgtctgtttg
catgtactccgtggaattggaaaggttttagtactttgttccgatgggtttttgtatatt
gttgattcgcttctttcactgccagtgaagaggttggcgggtttgaaaggagtttctttg
attgcgaaacgaattaggagcagcgagtctgagttttctagtctgtatgggagtgtggat
aataattctggatttgttagccctagtcaaaggcttctgcagagactaggaagtggtatg
cgaacaaatggcttgaaaattaaggaatcagaatcgccgcgtgaagaaagtgatttcgtt
tttgcagctctagttggtaaaaggttgattttatttgaagttgttttgggtcatcgaact
ggcagaagtgatcgaaatacaaatgatcccattgagtcccttctaattttgaaggagtta
cagtgtaaagaaggattttcaacaatggtgtggctcaatgattcaataattgttggtaca
gctagtggctattatcttttttcatgtgttacaggagagagtagtttaatattcaaatta
ccagagttatccagtcctccatgccttaagttgttgcggaaagagtgtaaagtgctacta
ttggtagatagggtagggattactgttaacgcttatggtcaacctatgggtgggagtctc
gtgtttcatgatattccaaaatctgttgctgagatatctacgtatgtggttgttgcaagt
agtggtcagctgaagttatatcataggaatactggtagctgtattcaaactattactttt
aatggaaacagaactgagccttgcattgtttcggatgaggaagatggtagtggagatgtt
attgccgttgctgtgactaacaaggttatgtgctatcaaaaattgccttgtgatgaacaa
attaaagatttgctgagaaggaagaactttaaggaagccatctctttggctgaggaccta
gagtgtgcaggtgaaatgtccaaggagatgctatactttgttcatgctcaaattggtttt
ctcttgctttttgacttgcaatttgaggaagcggtaaatcactttttgcaatctgagaca
atgcagccttctgaaatattcccatttgtgatgaaggacccaaatcgttggtccctactg
attcccagaaatcggtactgggcaatgcatccaccccctgctccctttgaagatgttata
gacgatggtttgcttgccatccagagagccacatttcttaaaaaagtaggagtagaaact
gctgtaaacgatgattttctcttgaatccaccgagtaggtcagatttgttggagtcggct
gtaaagcatattatcaggtatttggaggcttcccgcgataaagaattgatatcagctgtt
agagagggagttgacactcttttaatgtgcctgtatagaactttaaattctgttgacaag
atggaaaaactggcatcttcagaaaacagttgcgttgtggaggagttggaaactttatta
gaggactctggacatttgcgtacacttgctttcctttatgctagtaaagggatgagctca
aaggctcttgcaatttggcgtatcttggggagaaattatccatcccgccttttgatggac
tcttctatggatgagagtactatggatagcaatgttcgggatatatctggtaaggaagtg
gctgcagcagaagcatcaaagattcttgaggagtcatctgatcaagcattagttcttcag
cacctcggatggattgcagacatcaaccagcattttgccattcagattttgacatcagaa
aagagacaatctcaattatcaccagatgaaataataagggctattgattccaagaaggta
gaaatgcttcaaaggtatatacagtggttgattgaagagcaagagtcttgcgatcctcac
ttccactcactatatgctctctcattagctaaatcagcagtcgaacatgatagtactcaa
agccttgattcgtcatcagacccaaaaatttctgatcagagacttaactcaatatttgaa
cagccaatccgagaaaggttacagatctttttacagtcttcagatttgtatgatccagaa
gaggttttacacttgattgaaggatcagaattatggttggaaaaggctattctataccgg
aaactagggcaagaggcattggtgctccggattttagccttgaaacttgaagacagtgaa
gctgctgagcagtactgtgctgaaattggcagatcagatgcctatgtccagttactcgat
atgtatttggatcctcaaaatggtaaggagcctatgtttaaagctgctgttcgccttctc
cacaaccatggagaatcattggatccattccgagtcttagagactttgtccccaaatatg
ccgcttcatattgcgtcggaaacaatattgaaactgttgagagctcgatttcatcataaa
tgtcaaggacagattgtacataatacctcccgtgctctagaccttgaggcgaggttggcc
agattggaggaaagatcaagacatgctcagatcaatgatgagagcctctgtgattcttgt
cacgcacgccttggaactaaattgtttgcaatgtaccctgatgatacagttgtctgttac
aagtgctaccgtcgtcaaggagaatcgacatcggtcactggtcgaaacttcaaacaggat
atcctgatcaaacctggttggctagtgatggactaa
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