| Entry |
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| Name |
(RefSeq) SWI/SNF complex component SNF12 homolog
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| KO |
| K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
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| Organism |
csv Cucumis sativus (cucumber)
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| Pathway |
| csv03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:csv00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101216251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csv03021]
101216251
03036 Chromosome and associated proteins [BR:csv03036]
101216251
Transcription machinery [BR:csv03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101216251
Chromosome and associated proteins [BR:csv03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101216251
PBAF complex
101216251
GBAF(ncBAF) complex
101216251
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:complement(23457419..23460679)
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| AA seq |
547 aa
MSMNNNNPPKTLGGASSSPFGNSGMVPPSMAANSTSFSQPQPQAQLGAGFQNPFPLTTAQ
VLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPGLAG
VKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT
QLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTW
TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARS
PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV
KARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNS
PAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLG
FSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATG
SDAPGST |
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| NT seq |
1644 nt +upstreamnt +downstreamnt
atgtctatgaacaataataacccgccgaagacccttggaggggcttcttcgtcgcctttt
ggaaattctgggatggttccaccatctatggcagcaaattccacatcattttctcagccg
caacctcaagctcaattaggagctgggtttcaaaatccatttccgctgaccactgctcag
gttcttgcccaagctcaatacaaggctcacgctcatgcccaagctcaagcacaagcagct
cacgcccagtttcaagctcagttacaagctcaagggctgtccttaactcagagccaaaat
gttggtggtgggaacgtgggttcgccttccccaggattttccacacctggccttgcaggt
gtgaagcgaattcctcaaaagccgccagttcgccctcctattctttctcctggtaccacg
ttttcaccattgaaaacaatggaactcacacctgctgctcgtaaaaagaagcagaagctg
cctgagaagcagcttcaagataaagttgctgcaatcttgcctgaatctgctctctacact
cagctgcttgagtttgagtctcgtgttgatgctgctctcgcaagaaagaaagttgacatc
catgaggcgcttaaaaacccaccttgcattcagaaaactcttcgaatttatgtcttcaac
acatttgcaaatcaagttaacacaatacccaaaaagccaaatgctgatcctcctacctgg
actcttaagataataggcaggatcttggaagatgggatagatcctgatcatcctggggtc
gtacaaagatcaaaccctttatacccaaaattttcatctttcttcaagagagtaaccatt
tccttggaccagaggctatatccagatagtcacatcatagtatgggagaatgctcgatca
cctgcacctcatgagggcttcgaggtgaagagaaaaggggacaaagaattttcagttaac
attcgattagaaatgaattatattccagagaaattcaagttgtcgcctgctttgatggaa
gttcttggtatcgaagttgatactcgcccaagaataatagcagcaatctggcattatgta
aaggctaggaaacttcagaaccccaatgatccttctttctttcattgtgatccacctctc
cagaaggtatttggggaagacaaattgaaattcactatggtatcgcagagaatatcacaa
cacttgtttcctccacagcctatacatctggagcataaggttaagctttcaggaaatagt
ccagcaggtacagcatgctacgatgtgttggtcgatgtgcctttcccaattcaccgggaa
ttgtctgctctattagccaatgcagagaagaacaaggagattgatgcatgtgatgaagca
atttgtacagctataaggaaaattcacgagcatcgacggagacgtgcatttttccttggg
ttcagtcagtcaccagtggagtttattgatgccttgattgaatctcaaagcaaggatcta
aaacttcttgcaggagaagctagtcgaaatgctgaaaaggagcgacgatcagatttcttc
aatcaaccatgggttgaagatgctgtgattcggtacataaatcgaaaaccagccacaggt
agtgatgcacctggaagtacatga |
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