Cucumis sativus (cucumber): 101216251
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Entry
101216251 CDS
T02486
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101216251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101216251
03036 Chromosome and associated proteins [BR:
csv03036
]
101216251
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101216251
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101216251
PBAF complex
101216251
GBAF(ncBAF) complex
101216251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
MurB_C
Motif
Other DBs
NCBI-GeneID:
101216251
NCBI-ProteinID:
XP_004145668
UniProt:
A0A0A0LB48
LinkDB
All DBs
Position
3:complement(23457419..23460679)
Genome browser
AA seq
547 aa
AA seq
DB search
MSMNNNNPPKTLGGASSSPFGNSGMVPPSMAANSTSFSQPQPQAQLGAGFQNPFPLTTAQ
VLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPGLAG
VKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYT
QLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTW
TLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARS
PAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYV
KARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNS
PAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLG
FSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATG
SDAPGST
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacaataataacccgccgaagacccttggaggggcttcttcgtcgcctttt
ggaaattctgggatggttccaccatctatggcagcaaattccacatcattttctcagccg
caacctcaagctcaattaggagctgggtttcaaaatccatttccgctgaccactgctcag
gttcttgcccaagctcaatacaaggctcacgctcatgcccaagctcaagcacaagcagct
cacgcccagtttcaagctcagttacaagctcaagggctgtccttaactcagagccaaaat
gttggtggtgggaacgtgggttcgccttccccaggattttccacacctggccttgcaggt
gtgaagcgaattcctcaaaagccgccagttcgccctcctattctttctcctggtaccacg
ttttcaccattgaaaacaatggaactcacacctgctgctcgtaaaaagaagcagaagctg
cctgagaagcagcttcaagataaagttgctgcaatcttgcctgaatctgctctctacact
cagctgcttgagtttgagtctcgtgttgatgctgctctcgcaagaaagaaagttgacatc
catgaggcgcttaaaaacccaccttgcattcagaaaactcttcgaatttatgtcttcaac
acatttgcaaatcaagttaacacaatacccaaaaagccaaatgctgatcctcctacctgg
actcttaagataataggcaggatcttggaagatgggatagatcctgatcatcctggggtc
gtacaaagatcaaaccctttatacccaaaattttcatctttcttcaagagagtaaccatt
tccttggaccagaggctatatccagatagtcacatcatagtatgggagaatgctcgatca
cctgcacctcatgagggcttcgaggtgaagagaaaaggggacaaagaattttcagttaac
attcgattagaaatgaattatattccagagaaattcaagttgtcgcctgctttgatggaa
gttcttggtatcgaagttgatactcgcccaagaataatagcagcaatctggcattatgta
aaggctaggaaacttcagaaccccaatgatccttctttctttcattgtgatccacctctc
cagaaggtatttggggaagacaaattgaaattcactatggtatcgcagagaatatcacaa
cacttgtttcctccacagcctatacatctggagcataaggttaagctttcaggaaatagt
ccagcaggtacagcatgctacgatgtgttggtcgatgtgcctttcccaattcaccgggaa
ttgtctgctctattagccaatgcagagaagaacaaggagattgatgcatgtgatgaagca
atttgtacagctataaggaaaattcacgagcatcgacggagacgtgcatttttccttggg
ttcagtcagtcaccagtggagtttattgatgccttgattgaatctcaaagcaaggatcta
aaacttcttgcaggagaagctagtcgaaatgctgaaaaggagcgacgatcagatttcttc
aatcaaccatgggttgaagatgctgtgattcggtacataaatcgaaaaccagccacaggt
agtgatgcacctggaagtacatga
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