Cucumis sativus (cucumber): 101216475
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Entry
101216475 CDS
T02486
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B isoform X1
KO
K03253
translation initiation factor 3 subunit B
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101216475
03012 Translation factors [BR:
csv03012
]
101216475
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101216475
Translation factors [BR:
csv03012
]
Eukaryotic type
Initiation factors
eIF-3
101216475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
ANAPC4_WD40
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
101216475
NCBI-ProteinID:
XP_004139759
LinkDB
All DBs
Position
7:complement(9665583..9671197)
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AA seq
718 aa
AA seq
DB search
MADVMLMKEIEDSAGRLGIDLSQVDFDAIRLPPGENFGIISDDEEVLQEESLEFDSGFGN
IIVVDNLPVVPPEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDPTTTKTLGYCFIEYGTPQ
EAELAKEKTDGYKLDRAHIFTVNMFEEFNRLVKVPDEWAPPEINPYTPGENLQQWLTDEK
ARDQFVIRSGSDTEVFWNDARHLKPEPVYKRPYWTESFVQWSSLGTYLATIHRQGAAVWG
GAGTFNRLMRFAHQQVKLIDFSPGEKYLVTYSSHEPNNPRDANRIVINIFDVRTGKVMRD
FKGSPDDFVTGGTGGVAGVSWPLFRWDGGKDDKYFARIGKNVISVYETETFSLVDKKSLK
VENVMDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPNKEELRQKNLFSVSDCKMYWQS
NGDYLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFA
VIHGDNPKPDISFYSMRSTHSSGRVSKLTTLKGKQANALFWSPGGRFIILAGLKGFNGQL
EFYNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRILK
DHFFQFAWRPRPPSFLSPEQEEEIAKNLKKYTKKYEAEDQDVSMLLSEQDREKRKMLKDD
WDKWLNEWRRLHEEEKLLREKLRDGEASDEEEEYEAKEVEVEEILDVSEEVLSFDFEQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgatgttgatgaaggagattgaggattcagctggtcggcttgggatagat
ctctcccaagttgattttgacgccattcgtctacctcctggggagaatttcggaattatt
agtgatgacgaagaggttctacaagaggagagtctagagttcgattctgggttcggaaac
attatagttgttgacaatcttccggttgttcctccggagaagtttgagaagctcgaaggt
gttgttcgtaaaatttttggacagattggagtaattaaggatgatggtttgtggatgcct
gtagaccctactacaacaaaaactttaggttactgctttatcgagtatggcactccacag
gaagctgagcttgctaaagagaagactgatgggtacaagctggatagagcacatattttc
actgttaacatgtttgaggaatttaatagacttgtaaaagtcccagatgagtgggcccct
cctgaaattaacccatacactcctggggaaaatcttcaacagtggcttaccgatgaaaaa
gcacgagatcagtttgttattcgttctggttctgacactgaggtattttggaatgatgct
aggcatttgaagcccgaacctgtctacaagcgtccatactggaccgagagttttgtgcag
tggtcctcattggggacttacctagcgacaattcaccgacagggtgctgctgtttgggga
ggagcaggtacctttaaccgtctgatgcgttttgcccatcaacaggttaagttaatcgat
ttttctcctggcgagaaatatttggtgacttacagcagtcatgagcccaacaatccccgt
gacgcaaataggattgtgatcaatatttttgatgtaagaactggaaaagtcatgagagat
tttaagggaagtcctgatgattttgtcactggaggaactggtggtgttgctggggtatct
tggcctttgtttaggtgggatggtggaaaagatgataaatactttgccaggattgggaag
aatgtgatttcagtctatgaaacagagactttctcccttgttgacaaaaagtctttgaag
gttgaaaatgttatggatttctgctggtcacctacagatcccattattgcactgtttgtt
cctgagctaggtggtgggaaccaaccagctagggtgagtcttgtccagatccccaacaag
gaggagttgagacaaaaaaatctttttagtgttagcgattgcaaaatgtactggcaaagc
aatggggattatcttgctgtcaaggttgatagatatacaaagacgaagaaaagcacatac
tcagggtttgagcttttccgcataaaagagcgggatattcccattgaagtgttggagctt
gagaataagaatgacaagatcattgcgtttgcctgggagccaaagggtcacaggtttgca
gttattcatggtgataacccaaagccggatattagcttttactctatgcgaagcacacac
agcagtggccgagtgtcaaaacttacaacgctcaaaggcaagcaggccaatgctcttttc
tggtcgcctggtggacgttttattattcttgctggcttgaaaggtttcaatggacagttg
gaattctacaatgttgatgagctggagacgatggcaactgcggagcatttcatggctact
gatattgaatgggatcctactggaaggtatgttgctactgctgtaacttcggttcatgag
atggaaaatggtttcaacatttggtcctttaatggaaaactcctctatcgaatcttgaag
gaccatttctttcagtttgcatggcgcccgaggccaccatccttcttgagtcccgagcaa
gaggaagagatagctaagaatttgaagaagtacactaagaagtacgaagctgaagatcag
gatgtatctatgctactgagtgagcaagatcgtgagaaacggaaaatgttgaaggacgat
tgggacaagtggttgaatgaatggaggagattgcatgaagaagagaagttgttgcgggag
aagctgcgggatggtgaagccagtgatgaagaagaggaatatgaagccaaagaggttgaa
gttgaagagattctggatgtatcggaggaagttttgtcctttgattttgagcagtaa
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