Cucumis sativus (cucumber): 101216502
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Entry
101216502 CDS
T02486
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101216502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101216502
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101216502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_2
TIP49
AAA_14
AAA_22
AAA_16
RNA_helicase
AAA_28
AAA_33
AAA_17
NPHP3_N
nSTAND3
Rad17
AAA_18
IstB_IS21
Bac_DnaA
Parvo_NS1
Mg_chelatase
Viral_helicase1
AAA_3
Nucleolin_bd
ATPase_2
NACHT
TsaE
NB-ARC
Cytidylate_kin2
ABC_tran
AAA_11
Motif
Other DBs
NCBI-GeneID:
101216502
NCBI-ProteinID:
XP_004146387
UniProt:
A0A0A0L3U4
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All DBs
Position
4:complement(20365978..20375965)
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AA seq
816 aa
AA seq
DB search
MAGGKSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRTLKKSPFTSIVQQTLD
SHLNKTPKSIPSSSTPTKIKRRLQDSKTEDADCSTIGKKRPKRVDVGEQRLQNMENMHLR
RIQHNNQDDSSSSLSSSSSTGSGNSGDGAVSTSEDAIYGEKVEPEFDLMKLMLRTSYAES
KKLKNEHLEKSMELEVAIDDKVAEKINVGNEGNANKEISRKEKQSSLNREEIEGPWFKDL
GGMKSVLDELKMEVIVPLYHPQVPLWLGVRPMAGILLHGPPGCGKTKLAHAIANETGVPF
YKISATEIMSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVT
QLMTCMDGFHKLVDSKDASSKDDNSNVRPGYVLVIGATNRPDAVDPALRRPGRFDREIVL
GVPDENARAEILTVLTSNLRLEGSFDLLKIARATPGFVGADLTALANKAGNLAMKRIIDQ
RKCELSTDCAANEHIEDWWRQPWLPEEMEKLAITMIDFEEAIQMVQPSLRREGFSAIPSV
KWEDVGGLEQLRAEFDRYVVRRVKYPEDYEGFGVDLATGFLLYGPPGCGKTLIAKAVANE
AGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVV
ERLLNQLLIELDGAEQRRGVFVIGATNRPEVIDPAILRPGRFGKLLYVPLPGPTERGLVL
KALGRKKPIDVSVDLLAIGQMEACENFSGADLAALMNEAAMAALEEKLTLDNSNIESASC
TIKMVHFERGLTKISPSVSEKQKHFYEILSKSLKAA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggccggtggcaaatcgccgtccgttgtgaaccgtgggttccttcttcaacgtattaag
tcctgtcgtcacaaatgtcccaccgtcgacgacatcgtcgatcacctccaatccacctat
agggactaccgaaccctcaagaaatcaccattcacttcaatcgtccaacaaacccttgat
tcacatctcaacaaaacccctaaatccattccctcttcttccacgcccaccaaaatcaag
cgccgattacaagattctaaaaccgaagatgccgattgcagtaccattggaaagaagcgc
cctaagagagtcgatgtaggtgaacagaggttgcagaatatggagaatatgcaccttagg
aggatacaacacaacaatcaggatgattcttcttcgtctttatcttcatcttcttcgaca
ggttctggtaacagtggtgatggagcagtgtcaacgtcggaggatgctatatatggggaa
aaagtagagccggagtttgatttgatgaagttaatgcttcgaacatcttatgctgagtca
aagaaattgaagaatgagcatttggagaagagtatggagctggaagttgctatagatgat
aaggttgctgaaaaaattaatgtggggaatgaagggaatgcaaacaaggagatatcgaga
aaggaaaagcagagttctcttaatcgggaagaaatagaagggccttggtttaaggatttg
ggagggatgaaaagcgtgctagacgaattaaagatggaggtgattgttccactttaccat
cctcaggtcccattgtggttgggggttcggccgatggctggaattttgcttcatggaccc
cctggttgtgggaagactaaattggctcatgccattgccaatgaaactggtgtacctttt
tataagatttctgcaacagagatcatgtcgggtgtttcaggtgcgtcagaagaaaatatt
agggagctattttccaaagcctataggactgcaccatcaattgtttttattgatgagatt
gatgcaattgcatcaaagagagaaaatctacagagagaaatggagaaacggattgtaaca
caattaatgacttgcatggatgggttccacaagcttgtagattctaaggatgcaagttca
aaggatgataattccaatgttagaccaggatatgttcttgtaattggtgctaccaatagg
cctgatgctgttgatcctgcattaaggaggccgggtcgttttgatcgtgagatcgtatta
ggtgttccagatgaaaatgcaagagctgaaattctcactgttcttactagcaacttgaga
ctcgaaggttcatttgatcttttgaaaatagctagggcaactccagggtttgttggagct
gatttaacagcattggctaataaggctggtaatcttgccatgaagagaataattgatcaa
agaaaatgtgagttatctactgattgtgctgctaatgaacatatagaagattggtggagg
caaccttggttgccggaagagatggaaaaattagcgataaccatgattgactttgaggaa
gcaatacaaatggtgcaaccatcattgagaagagaagggttttctgcaattcccagtgta
aagtgggaggatgttggaggcttagaacaactaagagcagagtttgatcgctatgtagtt
agacgtgtaaagtatccagaggattatgagggctttggtgtagatctagctactggattt
ttgttatatggtcctccaggatgtggtaaaacactaattgctaaggccgttgcaaatgag
gctggagctaacttcattcacattaaggggcccgagttactaaataaatatgttggagaa
agtgaacttgctgttcgtacattatttagtcgggcaaggacgtgctcaccatgcattcta
ttttttgatgaagtggatgccttaacaacaaaacgtggtaaagaagggggttgggtagtg
gagcgattattgaaccagttactcatagagttggatggagcagaacaacgacgaggtgtc
tttgttattggtgctacaaatagacccgaggtcatagaccctgcgatactgcgaccgggt
agatttggaaaacttctttatgttcctcttcctggtccaactgagcgtggcctcgtctta
aaagctcttggaaggaagaaacctattgatgttagtgtagatttacttgcaattggacaa
atggaggcttgtgaaaattttagtggagcggatcttgctgccttgatgaatgaagctgca
atggctgctttggaagagaaattgacattggacaacagtaatattgaatcggcatcatgt
acaatcaagatggtccattttgagcgtgggctaactaagatttctccatctgtgtcagaa
aagcaaaagcatttttacgagattttgtcgaaaagcttaaaagctgcttaa
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