KEGG   Cucumis sativus (cucumber): 101216515
Entry
101216515         CDS       T02486                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SIRP1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csv04131]
    101216515
   04121 Ubiquitin system [BR:csv04121]
    101216515
Enzymes [BR:csv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101216515
Membrane trafficking [BR:csv04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    101216515
Ubiquitin system [BR:csv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101216515
SSDB
Motif
Pfam: zf-RING_2 Zn_ribbon_19 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_UBOX RING_XB3-XBAT31 zf-C3HC4_3 zf-ANAPC11 PRC2_EED_ins zf-RING_5 Rad50_zn_hook
Other DBs
NCBI-GeneID: 101216515
NCBI-ProteinID: XP_031739817
LinkDB
Position
4:complement(11006786..11008561)
AA seq 361 aa
MDELIATRYWCHMCSQMVNPIVDVEIKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNEL
ESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDDDDDDNEHEDGEGNRVSSETTELD
SVIRRRRSSATILQLLQGIRAGIATAESENSYEERSRERERVILINPFNQTIVVQGGENQ
NQNQNSIGSLGDYFVGPGLDLLLQHIAENDPNRYGTPPAQKEAVDALPTVRVELEEDSCL
QCSVCLDEFEVDEEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPGDESKRDVDGGSA
ARFMSDLNNGNGNGSGEIEGRNSSESGRRFSFPWPFNGLFTSQGNSSAGSASDSQRDHTS
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggacgagttaattgcaaccagatattggtgtcacatgtgttctcaaatggtgaatccc
atcgttgacgtggaaattaaatgccccttctgccgcagcggctttgttgaggagatagga
aatggtatttccagcgacaataacgataacaacaacaataacaataataacaacgagctc
gaatccgattttgggtcggagcgagctttgtctctctgggctccgatcttgctgggtatg
atgggaaatccccgcgggcgacgaagattcagacatctagagtttgacgacgacgatgat
gataatgagcatgaggatggcgaggggaatcgtgtgagtagtgagacgactgagcttgat
tcagtcattaggaggaggagaagttcagctaccattcttcagttgctccaaggtatcagg
gctggaattgcaactgctgaatcagagaatagttatgaggagaggagcagagaaagagag
agggttattcttataaatcccttcaatcagaccattgtagttcaaggaggtgagaatcaa
aatcaaaaccaaaactccattgggtcgctgggtgattatttcgtaggacctggtttggat
ttgttattgcaacatatagccgagaatgatcccaacagatatggcactccaccagcacag
aaggaggcagttgatgcgctgcccaccgtgagggttgaacttgaggaggatagctgtttg
caatgttcagtgtgtttggatgagtttgaggtggatgaagaagccaaggagatgccatgt
aagcataaatttcatacaggttgtattctgccatggttggagctgcatagttcttgccca
gtttgtaggcatcaattgcctggggatgaatccaagcgtgatgttgatggtgggtctgct
gcgaggttcatgagcgacctcaataatggtaatggcaatggcagcggggagattgagggg
agaaattcatctgagtctgggaggaggttttcgtttccatggccttttaatggcttgttt
acttcccaaggaaactcctcggctggaagtgcaagtgattctcaaagggatcacacttcc
atttga

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