Cucumis sativus (cucumber): 101216563
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Entry
101216563 CDS
T02486
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101216563
03015 mRNA surveillance pathway
101216563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101216563
03041 Spliceosome [BR:
csv03041
]
101216563
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101216563
Spliceosome [BR:
csv03041
]
Complex C
Other components
EJC/TREX
101216563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
101216563
NCBI-ProteinID:
XP_004140691
UniProt:
A0A0A0L734
LinkDB
All DBs
Position
3:14412800..14418247
Genome browser
AA seq
424 aa
AA seq
DB search
MGTNAADVEKTEDDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFAANGPRRG
FVRPGERNDAEDQPPAKRRLSSAVVKMAEDGEINEEAEGKDAVKDTSREETSGSDAVFQN
DARQNHLRQSGSFRLDGNKRARMDIDIPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTL
EKFRKEDKQLSGTEAFMRRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVA
AKAEEKKLELLFLRWSEHHKKLCNFIRTKTEPSIYYLPNKPLDEDATLAEQQRDEAFMEW
KASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGSNDVSNLQETMDKELDTHRLE
HGPKKRNIPGGSNNEDEDDVEDINVGEDDMIDDVLDVEENGRRGEETAKPEADVASPKAD
DTVQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaacgccgctgacgtcgagaaaacggaggacgatcttcgcaaagagatcgat
gagcttcaacgtcaacaacgggagattacagaacgccttcgtgatcctcgcggactccgg
agaggtggatttcctggacctggcccaagaaacttcgccgctaatggaccacgtcgggga
tttgttcgacctggggaaagaaatgatgctgaagaccagcctcctgctaaacggcggcta
tcttctgctgttgtcaagatggcggaggacggggagataaatgaagaagctgaaggaaag
gatgcagtgaaggatacatctcgggaagaaacttctggaagtgatgcagtcttccagaac
gatgcaagacaaaatcatttgcggcaaagtggttcgtttagattggatggaaataaaaga
gctaggatggatattgatattccagctgctgagaatgttccaagaatattgcctaagaat
gaggatcctagcttagttagcaggaacaagagaatgctgggtcagcttttgggaacattg
gagaaattcaggaaggaagacaagcaactctcaggaacggaagcttttatgagaagatcg
gattccttacaaagagccgagcaaagagcacgagaggaaagcgaaagattgaggcaacaa
gagcgtgaacagattgcagagaaacgaaagagagatctgatgcttagagctcgcgtggct
gccaaggcagaagaaaagaagttggaattactttttcttcgatggagcgagcaccataag
aaactttgcaattttataaggacaaagactgagccttcaatttattatttgccaaataaa
ccattggatgaggatgcaaccttggctgagcagcaaagagacgaggcttttatggaatgg
aaagcctccagaagggaggagttatctgagtatcagaaacagataggagaacagtacatt
gcaaatgttgagaaggacttggaaaggtggcaaaatgctaggagggcaagaaaaggaagt
aacgacgtatcgaatttgcaagaaaccatggacaaagaattggacactcatagacttgag
catggtccaaagaaaaggaacatccctggtggtagcaacaacgaggatgaagatgacgtg
gaagatattaacgttggggaggacgacatgatagatgacgtactcgatgttgaagaaaat
gggcgcaggggcgaggaaacagcaaaacctgaagctgatgttgcaagtccaaaagctgat
gatactgtgcagtag
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