Cucumis sativus (cucumber): 101216684
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Entry
101216684 CDS
T02486
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 11
KO
K24260
WD repeat-containing protein 11
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101216684
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csv03037
]
101216684
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Others
Others
101216684
Cilium and associated proteins [BR:
csv03037
]
Other cilia and associated proteins
Other cilium assembly proteins
101216684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
Beta-prop_WDR11_1st
WD40_CDC20-Fz
ANAPC4_WD40
TPR_GEMI5
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
101216684
NCBI-ProteinID:
XP_011656357
LinkDB
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Position
1:17213320..17230552
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AA seq
1336 aa
AA seq
DB search
MTSPRLSGPPPLPIHSSTQHHDSWDCMLPGPPSRNNFGSADISPSGLLAFPSGSSVSIVD
SRSMQLITAIPMPPPSTTATSLSPFVTSVRWTPLPLHRDLLSTEPSTSHLHLAAADRQGR
IALLDFRLKSPTIWFDTSDYKYGVQDLCWVRSGPDSYLLAAIHGASALSLYSVTTARCVW
KYDASPEYLSCIRYDPFDSRHFCVIGLKGFLLSVQVLGEKESDVVIKELRIGTDCTELLK
LERDAASGSSSPASAMFPLYNAKFAFSPKWRHILFVTFPRELVVFDLQYETALFLVPHCL
VGVVNSLMCYRIRTVSCSTVLTWMEGSVPGARKEGEQVHVMSAMEELLPSIGTSVPSPSV
LAVVICQSDSILQNVAKLCSDVRHSHSPSPDADAEAEAEAEADIVSPFDSYDECHPISST
HLISISDDGKVWNWLVTAEDTQTDDACVSMSTDVGGVPTSDSNTDQIVSSTNSLASEAGK
QLDHANTSCGRPPSGLSELDLSFKISLVGQLQLLSSAVTMLAVPSPSLIATLARGGNYPA
VAVPLVALGTQSGTIDVIDISANSVSSSFSVHNSVVRGLRWLGNSRLVSFSYSQVNEKSG
GYLNRLVVTCLRSGFNRTFRVMQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKTP
IMLRSLALPFTVLEWTLPTVPRPAKERTTMTSDTVSSPTKASLSDTKAQEGNQEETSESF
AFALVNGALGVFEVHGRRIRDFRPKWPSSSFVSSDGLITAMAYRLPHVVMGDRSGNIRWW
DVTTGHSSSFNTHREGIRRIKFSPVVPGDHSRGRIAVLFYDNTFSIFDLDSQDPLANSIL
QHQFPGTLVLELDWLPLRTDRKDPLVLCIAGADSSFRLVEIIINEKKHGYGRKTAKERFR
PMPICSPLLLPTPHALALRMILQLGVKPSWLKKKPQLVSGVSGGGHDLRSHMIDLPPVGD
SVVPEMLLKVLEPYRIEGCILDDARAKLYSKLVHKGSALRFAFAAAIFGESSEALFWLQL
PSALSHLMNKLANKSPQRGQSSMSNVDLDEASMLNRITSKGKSMPRTGKKETLGQGQLMA
MAFKQEELWESANERIPWHERLDGEEVIQNRVHELVSVGNLEAAVSLLLSTSPESSYFYA
NALRAVALSSAVSRSLLELAVKVVAANMVRTDRSLSGTHLLCAVGRYQEACSQLQDAGCW
TDAATLAATHLKGSDYARVLLRWANHVFHSEHNIWRALILYVAAGALQEALAALRESQQP
DTAAMFILACREIHAEFISNLENSDDESDSNALKNKLLKLPGLDPENDDVVAVGEYYGQY
QRKLVHLCMDSLPYSD
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgactagcccccggttgtcggggccgccgcctcttccgattcactcctccacacaacac
catgactcctgggactgcatgcttccgggccctcccagtcgcaacaacttcggatccgcc
gacatcagcccctccggtctcctcgctttcccctccggcagctccgtctccatcgttgat
tctcgttctatgcagctcatcaccgccatccccatgcctccgccgtcgactactgctact
tctctctcccctttcgtcacctctgttcggtggactcctctccctctccaccgtgacctc
ctttctacagagccctccacctcacaccttcatctcgctgctgctgatcgccaaggtcgc
attgctcttcttgatttccgtttgaagtcccctaccatctggttcgatactagcgactac
aagtacggtgttcaggatctgtgttgggtgcggtctggacccgattcgtaccttcttgct
gcaattcacggcgcctcggctctctccctctatagtgttaccactgctcgatgtgtctgg
aaatatgatgcttcccctgaatatctgtcttgcattcgttacgatcccttcgattcgcgc
catttttgcgtaattggtctcaaagggtttcttctctcggttcaggttcttggggagaag
gaaagtgatgttgtcattaaggagctgcggattggaaccgactgcaccgaattgctgaag
ctagaaagggatgcagcttccggatcatcgtcgccggcctctgccatgtttcccctttac
aatgcgaaatttgcattttcgccgaaatggaggcatattctgtttgtaacgtttcccagg
gagttggtggtgtttgacttgcagtatgagacggcgctttttttagtacctcattgcctc
gtgggtgtggtaaattccttgatgtgctaccggatccggacagtgagttgctctactgtc
ctcacctggatggaaggctcagtacctggcgcccgaaaagaaggtgaacaagtccacgta
atgtctgcaatggaagagttgctgccgtcaattggcacatctgttccatctccttcagtt
cttgctgttgtcatctgccagtccgattccatcctccaaaatgttgccaagctttgttct
gatgtacgtcattctcattctccttctcctgatgcagatgcagaagcagaagcagaagca
gaagcagatattgtttctccatttgattcatatgacgaatgccatcccatctcttcaaca
cacttgatatccatctctgatgatggaaaagtatggaactggcttgtaactgccgaagac
acgcagacggatgatgcatgcgtgagtatgagcactgatgtcggtggcgtgccaacttca
gacagcaacactgaccaaatagtttcttctaccaattcacttgcttcagaagcaggcaag
caactagatcacgccaataccagttgtggccgtccaccctctggcctcagtgaattggac
ttgtcatttaagatcagtttagttggtcagcttcagcttctttcttctgcagtaacgatg
ctggcagtgccatctccatccttgatagctacattagctcgtggaggaaactatcctgct
gttgctgtaccattggttgctttagggactcaaagtggaaccattgatgtcattgacatt
tctgccaattctgtgtcatcttccttttctgtacataatagtgttgttagaggtttacgg
tggctagggaattccagattggtgtcgttttcttacagtcaggtgaatgaaaaatctgga
ggttaccttaatcgtcttgttgtgacctgtcttagaagtggctttaatagaaccttccgt
gttatgcaaaagcctgaacgtgctcccatcagagctttaagagcttcttcatctggaagg
tatcttcttatcctgtttcgtgatgctcctgttgaagtttgggcaatgacaaagactcct
atcatgcttagatcattagctcttccatttaccgttctggaatggacacttccaacagtt
ccacggcctgctaaagagcgtacaaccatgacatcggataccgtatcttcaccaactaag
gcatcattatctgatactaaggcacaagaaggaaatcaggaggagacttctgaaagtttt
gcatttgcactggtaaatggtgcgcttggagtgtttgaagttcatggtcgaagaattcgg
gatttcagacccaaatggccttcatcttcttttgtttcatctgatggattaattacagcc
atggcctaccgcttgccacacgtggtcatgggtgatagatcaggcaacattcgttggtgg
gatgtaacaaccgggcattcttcatcttttaacactcacagagagggaatcaggcgaatc
aaattttcccctgtagttcctggagaccacagtagaggacgtatagctgttctattttat
gataatacattttccatatttgatcttgattcacaggatcccttggctaattccatttta
caacatcaatttccagggacccttgtattggaacttgattggttgcctttacgaacagat
agaaaagatcctctagtattatgtattgcaggagctgatagtagctttcgccttgttgag
atcataattaatgaaaagaagcatggctatggacgcaagacggccaaggaaagatttcgg
ccaatgcctatatgttcgcctttgttacttcctactccacatgcattggcattacggatg
atcttgcagttaggtgtaaagccctcctggttaaagaagaagcctcaactcgtatctgga
gtttcaggaggtggccatgaccttcggagtcacatgattgacttaccacctgttggtgac
tcggtggtgccagaaatgcttctcaaggtgcttgaaccttatcgtatagaaggttgcata
cttgatgatgcgagggcaaaattatattccaagttagtacataaaggctctgctttgagg
tttgcctttgctgctgcaatttttggtgaatcctctgaagccctcttttggctacagttg
cctagtgctctcagtcatctcatgaataagttagcaaataagtctccccagagaggtcaa
tcctcaatgtctaatgtggatcttgatgaagcttcgatgctgaataggataacctcaaag
ggaaaatcaatgccaagaactgggaagaaagaaacactcggtcaaggccaacttatggca
atggctttcaaacaagaggagttgtgggaaagtgcaaatgaacgcattccttggcatgaa
agattggacggggaagaggttattcaaaaccgtgtacatgagcttgtatctgttggaaac
ttagaagccgctgttagcttactgctttccacttctccagagagttcttacttctatgca
aatgctctacgtgctgttgcactttcttcagcagtgtcaagatcacttctagaactggct
gtcaaggttgttgcagccaacatggtgagaactgatcggtcgttgtctggaactcatctt
ctctgcgctgtaggaagatatcaagaagcttgttctcagcttcaagatgctggatgctgg
acggatgctgcaactttagctgccacacatttaaaaggatctgattatgctagggtgctg
ctaaggtgggccaatcatgtattccatagcgaacataacatctggagggcgctgatattg
tacgtcgcagctggtgcactacaagaggcactggcagcacttcgtgagtcgcaacaaccc
gacactgcagctatgttcatcctggcatgtcgagaaatacatgcagaatttatctccaat
ttagaaaattcagatgacgagtcagactcaaatgctttgaaaaacaaactccttaagttg
cccgggttggaccctgaaaatgatgacgttgtcgcagtcggtgaatattatggacaatac
cagagaaaacttgtgcacctctgcatggactccctgccgtattctgattga
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