KEGG   Cucumis sativus (cucumber): 101216734
Entry
101216734         CDS       T02486                                 
Name
(RefSeq) lysine-specific demethylase 5D isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csv01009]
    101216734
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csv03036]
    101216734
Enzymes [BR:csv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101216734
Protein phosphatases and associated proteins [BR:csv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101216734
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101216734
SSDB
Motif
Pfam: JmjC PLU-1 PHD JmjN zf-C5HC2 ARID KDM5_C-hel PHDvar_NSD BT_3657-like_N
Other DBs
NCBI-GeneID: 101216734
NCBI-ProteinID: XP_011654753
UniProt: A0A0A0KKJ7
LinkDB
Position
5:1780183..1801297
AA seq 1846 aa
MGKGRPRAVEKGVIGQNLSVCPSTSSNIPSGPVYHPTEDEFRDPLEYIYKIRPEAEPYGI
CRIVPPKNWKPPFALKLDSFTFPTKTQAIHQLQVRPAACDSKTFELEYNRFLDDHFGRKM
KKKVVFEGEELDLCKLFNAVKRYGGYDKVVKEKRWGEVFRFVRSTKKISECAKHVLCQLY
REHLYDYENYYSKLNKDVTKSSKRKIQDEKLSEFLAEFSTSKRRRQNTDDGRASVSKLKE
EENNDQICEQCKSGLHGEVMLLCDRCDKGWHTYCLSPPLKQVPPGNWYCLDCLNSEKDSF
GFVPGKCFSLEAFKRMDYRAKKKWFGSGSASRMQIEKKFWEIVEGSFGEVEVKYGSDLDT
SIYGSGFPRENVQRPESIDAKAWDEYCNSPWNLNNLPKLKGSMLRAIRHNITGVMVPWLY
IGMLFSSFCWHFEDHCFYSMNYLHWGDPKCWYSVPGSEATAFEKVMRNSLPDLFDAQPDL
LFQLVTMLNPSVLQENGVPVYTVQQEPGNFVVTFPRSFHGGFNLGLNCAEAVNFAPADWM
PYGGFGEELYQLYHKPAVFSHEELICVIAKTDCSDRVSPYLKKELLRIYSKEKSWREQLW
KNGVIRSSSLPPRKCPEYISTEEDPTCVICKKYLYLSAISCRCRRSAFVCLEHWQHLCEC
KYSRRRLLYRYTLAELYDLIGIIDRCGSGDTTKSKDFRQAGLCYTERCTLTKKVKGGCVT
LSQLAEKWLLHSNKVLQDPFSNEACVKALREAEQFLWAGHDMDHVRDVVRNLDETQKWVQ
GIGDSLSKIEAWSCDLSGSSEKICLDHVNNLLSLPSISCNHPGYLKLKDYVEEAKILIQD
IDNALSTCPDVSEWEILYSRVCSFPIHIEESEKLSENISIAKSCIESVREILEKQPAALE
LEVLYKLKSKILELGIQLPETEMVLDLTRQAELHRSRCAEIMNGPMNLKTVELFLQESKG
FAVNIPELKLIRQYHDDVVKWHARLNAVLVNVQEREDQHTVIEELNCILRDGLSLTIKVD
DVPIVEVELKKASAREKAQKLQVTKVSMEFIQKLMNEAVELEIDKEKLFADIRGVLDSAM
SWEKRAMNFLAHGAELSDFEEIIRSSEGLRVILPSLHDVKNELSSAKSWLNISKPFLEYV
LPLPSAPRSQLNVETLKELVSQSKFHKVALEESRVLAAVLRKCEDWKDGANSLLQEIDNL
WNVDDIGDGLSNCLILKIKQLVDRINAIITAGISLGYDFSEISRLQSACSTLMWCNKVLS
LCDAIPSYQEVESLMKVEEDNSCFFASGVLWSLLVEGVKWLKQALEVIPGTCNSKQRKLS
DAEELLSNSQRIKINFSAMNGQLVNAIQKHKLWQEEVRQFFIMERAERSWALLLKLKEEG
DIVAFNCSELHLIFSEAEKIERWKKQMEEIMKTSFGDGRPLLGCLGEIKKSLDRAIYIYE
KPLLYADQNLCVCCSSDSQDQHLFACSVCEESYHLQCLGKAREKTSNTDIFICPYCYSSR
GELSIDESGGPLRYLANRPDLEMLTKLKSDAVNFCVWLEEEDVLKQLIEQALVCKSHLSE
VLDFSSRCHDKDFSIACKRLTVVLKAMDVAGINDHEGKRGLEMELLRNSWRFRVKEALEG
SEKPTMQQVLELLEEGSVISILPEDCYRRKLLEVKIVCSKWRSLARKISADCGALELEKV
FELIEEGENLPAYLERELKLLRNRSMLYCICRKPNDRRPMLACDICEEWYHFDCVKIEST
PKVYICPACKPQVDNKMLIQLSMEYESETSAKFVEPKTPSPQHTKRRSKPKKTKRNLVRS
VTDCYREFRSSSGMESLWWQNRKPFRRVTRRRAEFGSLSPFSLIKQ
NT seq 5541 nt   +upstreamnt  +downstreamnt
atggggaaaggaagaccaagagctgtggaaaagggggtaatagggcagaatttgagtgta
tgtccatcaacttcatcgaacataccatctgggcctgtgtatcatccaactgaagatgaa
tttagagacccattggagtatatatataagatcagacccgaggctgagccgtatgggatt
tgtaggatagtgcctcccaagaactggaaacctccatttgcattgaaattagattctttt
acatttcccacaaaaacacaggccattcatcaattgcaggttagacctgctgcctgtgat
tcaaagacttttgagcttgaatataataggtttttggatgatcattttggcagaaagatg
aagaagaaggtggtttttgagggagaggagttggatttatgcaagttatttaatgcagtg
aagcgttatggtgggtatgataaagttgttaaggagaagaggtggggtgaggtttttagg
tttgttagatcaacaaagaagatttcggaatgtgctaagcatgtgctgtgtcaattatac
cgggaacatctatacgattacgagaattattatagtaaactgaataaggatgtcacgaag
agttcaaaaaggaaaatacaagatgagaagctcagtgaattcttggccgaattttcaaca
tctaaaaggaggcggcagaacactgacgatggcagagccagcgtctcaaagttaaaagaa
gaagagaataatgatcagatttgtgaacaatgtaaaagtggattgcatggtgaagtgatg
cttctatgtgataggtgtgacaaggggtggcacacatactgtctctcacctcccttgaag
caagtcccacctgggaactggtactgtttagattgcttgaattccgagaaggacagtttt
ggatttgtccctggcaaatgtttctccctggaagcatttaagcgtatggattatagggcc
aagaagaaatggtttggctcagggtctgcttctagaatgcaaattgagaagaaattttgg
gaaattgtggaaggttcatttggtgaagttgaagttaaatatggcagtgacttggacaca
tcaatttatggcagtggctttcctcgtgaaaatgttcagagaccagaatcaattgatgct
aaggcttgggatgaatattgcaatagtccgtggaatctcaataacttgcccaaattgaaa
gggtccatgcttagagccattcgtcacaatattactggtgttatggtgccctggttgtat
attggaatgctattttcatcgttctgctggcattttgaagaccattgtttctattcaatg
aattacctgcactggggtgacccaaaatgctggtatagtgtacctggtagtgaagctact
gcttttgagaaggttatgcggaacagcctacctgatctttttgatgcacaacctgattta
ctttttcaacttgttaccatgttgaatccatccgtcttacaagaaaatggcgtacccgtt
tatacagtacaacaggagcctggaaattttgttgtgaccttccctagatctttccatggg
ggttttaatcttggattaaattgtgctgaggccgtaaattttgctcctgctgactggatg
ccttatggtgggtttggagaagagttgtatcagctttatcacaaacctgctgttttttct
cacgaggagcttatctgtgtgatagcgaagacggattgtagtgaccgagtgtctccttac
ctaaagaaagagttactcaggatttattctaaggagaaaagttggagggaacaactttgg
aaaaatggtgtaataagatcttcttcattgcctcctcgaaagtgtcctgaatatattagt
acagaggaggatccaacatgtgttatatgtaagaagtacctttatctttcagctataagt
tgccgttgtaggagatctgcttttgtatgtttggagcactggcaacacctttgtgaatgc
aagtacagcaggcggcgccttttgtatcgttatacactcgctgaactatatgatttgatt
ggtataattgatagatgtggttctggggatacaactaaaagtaaggattttcgacaagca
ggcttatgctacactgaacgatgtactttgacaaaaaaggtgaaaggtggttgtgtcact
ctgtcccaacttgcagaaaaatggttactgcattcaaataaggttcttcaagatccattc
tcaaatgaggcatgtgttaaggctttgagagaagccgagcaatttctttgggctggtcat
gatatggatcacgtccgtgatgttgtaagaaacttggatgaaactcaaaagtgggttcaa
ggcattggagattccctttctaaaattgaagcgtggtcatgtgatctttctggaagttca
gagaaaatttgcttggatcatgtaaacaatttgttgagtctaccctcaatatcatgtaac
catcctgggtatcttaagttgaaggattatgttgaagaagcaaagattttgatacaagat
attgataatgccttatcaacatgccctgatgtttctgaatgggaaattttgtactcaaga
gtgtgttcctttccaatccatatagaagaaagtgagaagttatcagaaaacatatcaata
gcgaagtcttgcatagaaagtgtcagagaaatattggagaaacagcctgctgctcttgag
cttgaggttctttacaagttgaagtctaagatcttggaactcggaatccagcttccagag
acagaaatggtgctggatttaacaaggcaagctgaactacatcgttctagatgtgcagaa
attatgaatggtcccatgaacttgaagaccgttgaactattccttcaagaatctaagggt
tttgctgttaatatacctgaactgaaacttataagacaatatcatgacgatgttgtcaaa
tggcatgctcgtcttaatgctgttctggttaatgttcaagaacgggaggatcaacatact
gtaatagaagaattgaattgcatcctgagagatggattatcattgacaataaaagttgat
gatgtacctatagttgaggttgagttgaagaaggcttctgccagggaaaaagctcaaaag
ttacaggttaccaaggtttccatggaattcatacagaaattgatgaatgaggctgtagag
ttagaaattgataaggaaaaattgtttgctgatattcgtggagttctcgattcagcaatg
agttgggaaaagagagctatgaattttctagcgcatggggctgagctatctgattttgaa
gagattataaggtcttctgaaggtttacgtgttattctaccttcgcttcatgatgtcaag
aatgaattatcctcggccaagtcttggctaaatatttcaaaacctttcttagagtatgtt
ctccctttgccatctgcaccaagatcgcagctgaacgtcgaaacactaaaggagttggtt
tctcagtcaaaattccataaggtcgctttggaagaaagcagagtgcttgctgcagtcctg
agaaaatgcgaggattggaaagatggagcaaactctttattgcaagaaattgataatctt
tggaatgtggatgatataggggatgggctgagcaattgtcttattcttaagattaaacaa
ttagttgatagaatcaatgctattattacagccggtatatctcttggttatgactttagt
gagatttcccgacttcaaagtgcttgttctacactcatgtggtgcaataaagttctttct
ctttgcgacgctattccttcttatcaggaggttgagagcttgatgaaagttgaagaggac
aattcttgtttttttgcctctggtgttttgtggagcttattggtggaaggcgtcaaatgg
ctgaaacaagccttagaggtgattcctggaacgtgcaattctaaacaaagaaagttaagc
gatgctgaggaattgctttccaactctcagagaatcaaaatcaacttctcagccatgaat
ggtcaacttgtaaatgctattcagaagcacaagttgtggcaggaagaagtacgccaattt
ttcattatggagcgtgctgaacgatcatgggctctgttattaaaacttaaggaagaagga
gacatcgttgccttcaattgttcagagctacatttaatcttttctgaagctgaaaagatt
gaaaggtggaagaaacaaatggaggaaatcatgaagacgtcttttggagatggaagacct
ctgcttggttgtctaggagagataaagaaatcactggacagagccatatacatatatgag
aaaccgttgctctacgccgatcagaacttatgtgtttgttgctctagcgattcacaggac
cagcatctttttgcttgctcagtatgtgaagaaagctaccatttgcagtgcctagggaaa
gcaagagaaaaaacaagcaataccgatatctttatatgcccttattgctatagctcaagg
ggtgaattatcaattgatgaaagtggaggtcccttgagatatttagcaaatcgtcctgac
ctagaaatgctcactaagcttaaatctgatgccgtgaacttctgtgtctggttggaagag
gaagatgtattaaagcaactgatagagcaggctttagtatgcaaatcccatttgtcagaa
gtcttggacttctcatcacgttgtcatgataaagattttagtattgcttgcaagaggtta
acggtagtgttaaaggctatggacgttgcaggcattaacgaccatgaaggcaagcgtggc
cttgagatggaattattgaggaactcgtggagattcagagtcaaggaagctcttgaaggt
tctgaaaaaccaacaatgcaacaggtcctggagcttctggaagagggatctgtgataagc
attctgccggaagattgctacagacggaagcttttggaagtgaagattgtttgctcaaag
tggagaagtcttgcaaggaagatttcagccgactgtggggcacttgaattggagaaagtt
tttgaattgattgaagagggtgaaaatttacctgcatacctcgagagggagctcaagtta
ttaagaaatcgaagtatgctttattgcatttgccgcaagccaaatgatcgcaggccaatg
cttgcttgtgatatttgtgaagaatggtatcactttgattgtgtcaagatagaatctact
cccaaggtatacatttgccctgcttgcaaaccgcaagttgacaataaaatgttgattcag
ctatctatggaatatgaaagtgaaactagtgcaaaattcgtggagccaaagaccccttct
cctcaacacacgaagcggagatcgaagcctaagaaaacaaagcgaaatttagttcgaagt
gtgacggattgctatagagaattccggtcctcaagtggaatggaatccttatggtggcaa
aataggaagcctttcaggagagtaaccagaaggagagcagaatttggaagtctttctcca
ttttccctcataaaacaataa

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