Cucumis sativus (cucumber): 101216810
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Entry
101216810 CDS
T02486
Name
(RefSeq) autophagy-related protein 11 isoform X1
KO
K08330
autophagy-related protein 11
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101216810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101216810
03029 Mitochondrial biogenesis [BR:
csv03029
]
101216810
Membrane trafficking [BR:
csv04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
101216810
Mitophagy
Scaffold proteins
101216810
Mitochondrial biogenesis [BR:
csv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101216810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
FliD_C
DUF8429
IKKbetaNEMObind
DUF445
IMS_C
Motif
Other DBs
NCBI-GeneID:
101216810
NCBI-ProteinID:
XP_004144719
LinkDB
All DBs
Position
2:3974980..3983858
Genome browser
AA seq
1152 aa
AA seq
DB search
MSSSVTDSGANSGKLLVHVSENGHSFQLDCHEGMLVEDVMRLIESVTGINCNDQVILSLD
VRLESQRPLSVYKLPADDREVFLFDRCRLQSNSLPPPPEQIDILDLVEPPSPSSSQDSHP
LDDASDPALKALPSYEREFRYHYHKAHMIYSSTMMKYECCERLLREQRVQERAIEVARGN
LDQYYKMITQNYTDFMKRYSQQHRIHSDLLMNLDRDIGKLRSVKLHPALQTVNRKCLLDF
VKEDNLRKSAENCSSSHSQFENKVFQFKDIFNEVKRKVEDLFSSRASFSIKNLELNIKDH
QRYISDQKSIMQSLSKDVDTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDVHDKNHLPR
MQACDRAVSKLLDVCKDKKNQMNNFLHYYMQKIAYNSYIIKDVKLQFPVFKEAMGRQDDL
FMDLKLVRGIGPAYRACLSEVVRRKACMKLYMGMAGQMAERLARKREDEVRRREMFLTEH
GGYFPRDVIESMGLNDIPNPCDVHISPYDECLIDVGILDLDRYAPEYLLGFPWKNEKQGI
TKDSSIKSIGALSSGEAEESSKDTFESYGSGELVEGSELIEIAGTSKLEVENAKLKAELA
SALATICSFSSEYDLSDDSKLDSVLKNAAEKTAEALRLKDEYGKQLQRMLKTKQMQCESY
ERRIKELEQRLSDQYVQGQSLSSNVVSDFSVSAVKSGDCKPQILGGPEAPALCVSTSEPM
DEVSCISNSLDVKLGLFAEQPGRVREAVDENMLDSRGDQNPHLDSSMMEPNREEFQDNDK
YVRDKVAGQMGISLTNSSTAESMPRSLNVLPCETVENPNLESNIPNGLLLELQNALADKT
ILLSETETKLKGSLEEVVVLKRDLEASRKLLDESQMNCAHLENCLHEAREEAQTHLCAAA
RRASEYTALRTSAVKMRGHVERLKSYVFAPNGAAAFAHSLRTLAQSLANSGSDNENDGTN
EFRQCIWAIAERVGHLVKQHEKYAKLEATNEQLVKELEEKKELVKTLYTKHQLEKQANKE
KISFGRMEVHEIAAFVRNAAGHYEAINRNCANYYLSAESVALFADNLLTRSNYIVGQIVH
IEHQTVKPSPPSPRRDHGTVDQTDCVISDSGTDRLTLNSGLSSNPYGLPVGCEYFIVTVA
MLPDTAIHSTAS
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaagcgtgacagattctggtgcaaatagcggcaagttgctggttcatgtttct
gaaaatggacattcatttcagcttgactgtcacgagggtatgctggttgaggatgtgatg
cgtttgattgagtcggtcactgggattaactgtaatgatcaagttattctctctttggat
gttagacttgaatcgcagagacccctttcggtttacaagcttccagctgatgatcgggaa
gtttttttgtttgatcgatgcaggctacaaagcaattcgcttccgcctccaccggagcag
attgatatccttgatcttgttgagccgccatcaccttcctcttctcaagattcccatcct
ttagatgatgcatcagaccctgctttgaaagctttgccttcttatgagcgtgagttccgt
taccattatcacaaagctcatatgatatacagtagtacaatgatgaaatatgaatgctgt
gagaggcttttgcgagagcagagggttcaagagagagctatagaagttgcaaggggtaat
ttggatcaatactataaaatgattactcagaactacacagatttcatgaagcgctattcg
cagcagcatcgtattcattctgatttgttgatgaatttggatagagacattgggaaattg
aggtctgttaagcttcatcctgccttacaaacagtcaaccgcaagtgcttactggatttt
gtaaaggaagataatttgcggaaatcagcagaaaattgcagcagttcgcacagccagttt
gagaacaaagtttttcaatttaaggacatattcaacgaggttaagcggaaagttgaggat
ttgttttccagcagggcttctttctctataaaaaatttggaactgaatataaaggatcat
cagcggtatatcagcgaccaaaagagtataatgcagtccttgagcaaagatgttgacact
gtaaagaaactggtggatgattgcttatcttgtcagttatcttcctcacttcgccctcat
gatgcggtttcggccttaggtcctatgtatgacgtccatgacaaaaatcatctgccaaga
atgcaagcttgtgatcgtgcagtttccaaactacttgatgtttgtaaggataaaaagaat
caaatgaacaacttcttgcactattacatgcaaaagatcgcttataactcttacatcatc
aaagatgtcaaattacaatttcctgtttttaaagaggcgatggggcgtcaggatgaccta
tttatggacctaaagttagtgcgagggattggtccagcctatagagcttgtctttctgaa
gttgtgagaaggaaagcttgcatgaagctttacatgggtatggctggtcaaatggctgaa
aggcttgcaagaaagagggaggatgaagttagaaggcgtgagatgtttctgacggaacat
ggtggatactttccaagagatgtgatagaatccatgggactaaatgatattcctaacccg
tgtgatgtccatatatctccttatgatgaatgtttgattgatgttggtatcttagacctt
gaccgttatgcccctgagtacttgttaggattcccttggaagaacgagaagcaaggaatc
actaaggactcctctataaagtcgattggagctttgagttctggtgaggctgaagaaagt
tcgaaggatacctttgagagttatgggtctggtgagcttgttgaaggttctgagttaata
gagattgctggaaccagcaagttggaagttgaaaatgcaaaattgaaagctgaacttgcg
tctgctttagccacgatatgttcattttcttctgaatatgatttaagtgacgatagcaaa
cttgacagtgtcttaaagaatgctgctgagaaaacagctgaagccctgcgtcttaaagat
gagtatggaaaacaacttcaacgaatgcttaaaactaagcaaatgcagtgtgaatcatac
gaaagacgcattaaagagttggaacaaagactgtcagaccagtatgtgcaggggcaaagt
ctctcaagtaatgtggtgtctgatttttcagtttcggctgtaaagagtggtgattgcaaa
ccacaaatcttaggtggtccagaagcccctgcactttgtgtatctacttcagagccaatg
gatgaggtttcttgcatctcaaattcactagatgttaagctggggctctttgctgaacaa
cctggcagagtgcgtgaagcagtggatgaaaatatgttggattcccgtggtgatcagaat
cctcatttggattcctcaatgatggaaccaaatcgtgaagaatttcaagacaatgataaa
tatgttagagataaagtagcagggcagatgggaatatctctgacgaacagttccacagct
gagagcatgcctcggtctctgaatgtcttaccttgtgaaacagtagaaaatcccaatttg
gaatctaatattccaaatggccttctgctggagttgcaaaatgcgcttgcagacaagacc
attttgttgagtgaaactgaaaccaaacttaaaggttctttggaggaggttgtcgtactg
aagagagatttggaagctagtaggaaacttcttgatgaatctcagatgaattgtgcccac
ttggagaattgtctgcatgaagcgagagaggaagctcaaacccatctttgtgcagctgct
cgtagggcttcagagtatactgcacttcgtacatcagctgtgaagatgcggggccacgtt
gaaagactaaaatcttatgtttttgctccgaatggagcggctgcttttgctcattcgtta
cgcactttagcacaatctttagccaattctggcagtgacaatgaaaatgatggcacaaat
gaattccggcaatgtatctgggctatagcagaaagagttggacatttggtcaaacaacac
gagaaatacgcaaagcttgaagctaccaacgaacaacttgtcaaggaactggaagagaag
aaagagcttgttaaaactttatacacaaagcatcaactcgagaagcaggcaaacaaggag
aagatttcttttggtcgaatggaagtccatgagattgctgcattcgttaggaatgcagct
gggcattatgaggcaattaatcgtaattgcgccaactactacctgtctgctgaatccgtg
gctttatttgctgacaatctcctaactcgttctaactacattgttgggcagattgtccac
attgaacaccaaactgtgaaaccatcaccgccttctcctcggcgtgatcatggtacggtg
gatcaaactgattgtgtgatctccgactcggggactgacaggttgaccttgaattcaggt
ttatcttcgaacccatacggtctcccggtcgggtgtgaatattttatagtgaccgtagcg
atgttaccggatactgctattcattcaacagcttcctga
DBGET
integrated database retrieval system
