Cucumis sativus (cucumber): 101216950
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Entry
101216950 CDS
T02486
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
csv03015
mRNA surveillance pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101216950
09122 Translation
03013 Nucleocytoplasmic transport
101216950
03015 mRNA surveillance pathway
101216950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101216950
03041 Spliceosome [BR:
csv03041
]
101216950
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
101216950
Spliceosome [BR:
csv03041
]
Common components
Common spliceosomal components
Cap binding complex
101216950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Par-4_C
ParcG
Motif
Other DBs
NCBI-GeneID:
101216950
NCBI-ProteinID:
XP_004139050
UniProt:
A0A0A0M082
LinkDB
All DBs
Position
1
Genome browser
AA seq
864 aa
AA seq
DB search
MSSWKSLLLRIGDKSPEYATSSDFKDHIETCFGAVRRELDHYGDEVLPFLLQCVEQLPHK
TPLYGTLIGLMNLENEDFVKKVVEKTHESFQDALNSGDCHKIRVLLRFLTALMSSKVLLS
TSLVVVFETLLSSAATTVDDEKGNPAWQARADFYITCILSCFPWGGAELVEQVPEELERV
MVGVEAYLSIRRQTLDTGLSFFEDDGEVEKTLNEKDFLEDLWGRIQMLATGGWKVDSVPR
PHLLFEAQLVAGKSHEFGAIKCPEQPNPPPTLSGITYGKQKYDAELNYPQRIRRLNIFPS
SKFEDVQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLLL
PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKVKQSIENAPGLEELLPPK
GGPSFKFSTEDDGEKSEQHALSAELYNMVKGRAPARELISWLDESVIPKHGLDVSLVVVV
QTLLDIGSKSFTHLITVLERYGQVISRICHDQDKQVLLISEVGSYWKNNTQMTAIAIDRM
MGYRLISNLSIVKWIFSPENLQLYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDVV
AAEEAAARTQEELSAAESKLSLVDGEPVLGENPVRLKRLKSYAGRAKEQEISIRDSLEAK
EALLARALEENEILFLSLYKSFSSILTERLPASAQTLQDLKSTNPADANAMDVEEPSAME
MDNVESRPEKSHLNGRTEHAYTVCENEQWCLTTLGYVKAFSRQYASEIWPHIEKLDAEVL
LSEDSHSLFRKAVYSGLRRSLDST
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggaagagtcttcttctccgaattggtgacaagtccccggaatatgccacc
tcctccgacttcaaagatcacattgaaacctgctttggtgcggttcggcgggagctggat
cactatggagatgaagttctacctttccttctgcaatgtgttgaacaattgcctcacaag
actcctctgtacgggacattgattggactaatgaatttggaaaatgaagacttcgtgaag
aaagttgtggaaaaaactcatgaaagttttcaggatgccttaaactctggagattgccac
aagatccgagttttgttacggtttctaactgcattgatgagcagtaaagttctactatcc
acatctctcgtagttgtttttgaaacattactctcttcagctgccacaacagtggatgat
gagaagggaaatcctgcatggcaggcacgtgctgacttttacataacttgcattctttct
tgttttccctggggaggcgctgaactggttgagcaagttcctgaagagcttgagcgggtt
atggttggagtagaagcatacttaagcattcgaagacagaccttggacactggcttatcc
ttttttgaggatgatggtgaagttgagaaaactcttaacgagaaggattttttagaagat
ttatggggtcgtatacaaatgttagctactggtggatggaaagtggatagtgttccaagg
cctcaccttctatttgaagctcagctagttgctgggaagtctcatgaatttggagccatc
aaatgtccagagcaacctaatcctcctccaacactatctggcattacgtatggtaaacag
aaatatgatgcagagttaaattatcctcaaaggatacgtcgacttaatatatttccatct
agtaaatttgaggatgtacaacctattgatcgctttgtcgtggaggaatatcttttagat
gtgcttctgttcttcaatggctgtcgaaaggaatgtgcatctttcatggttggccttcct
gtgccttttagatatgagtatcttatggcagagacaattttctcgcagctactcctgcta
cctcaacctccattcaaacctatttattatacgctggtcattattgacctttgcaaggct
cttcctggggcctttcctgcagttgtagctggtgcagttcgggccctatttgagaaaatt
gccgatttagacatggagtgccgcatacgattgatactttggttttcacaccatttatca
aactttcaatttatatggccatgggaagaatgggcttacgtactagaacttccaaaatgg
gccccacaaagagtgtttgtgaaggaggttctggatcgagaggtccgtctatcatattgg
gataaagtgaagcagagcattgagaatgcacctggtttagaagagttgctacctcccaag
ggtggaccaagcttcaaattttccacagaagatgatggagaaaaaagtgaacaacatgca
ctttctgctgaattatacaatatggtgaaaggacgagctccagcacgtgaactaatttca
tggttggatgaaagtgtcattccaaagcatggtttagatgtttctctcgttgtggtcgtg
caaactcttctggatattgggtcaaagagtttcactcatttgataacagtcttggagaga
tatggacaagttatttcaagaatatgccatgatcaggataagcaggtcttgcttatatct
gaagtgggttcttactggaagaataatactcaaatgacggcaatagcaattgatagaatg
atgggttataggttaatttccaatttgtccatcgttaaatggatcttttctccagaaaat
cttcagctatatcatacatcagatcgtccatgggagatattaaggaatgcattgtgcaag
acatataatcgtatttctgatcttagaaaagaaatatcctccctgaagaaagatgttgtt
gcagctgaagaagctgctgctaggacacaggaagaattgagtgctgctgaatcaaagctc
tcacttgtggatggtgaacctgttttgggagagaatcctgtgagattaaagcgattgaaa
tcttatgctggaagagcaaaagagcaggagatatcaatacgggactctttagaagccaaa
gaagctcttcttgctcgagctctcgaggagaatgagatattatttctatctttgtacaaa
agcttttccagtatattgacagaacgccttccagctagcgcgcaaactctgcaagatttg
aagtctactaatcctgctgatgcaaatgctatggacgttgaagaaccatcagccatggag
atggacaatgtagagtcaagacctgaaaaaagtcatttgaatggtagaacagagcatgcc
tacactgtatgtgaaaatgaacaatggtgtttaaccaccttgggatatgtcaaggccttc
tcgaggcaatatgcttccgagatatggccacacattgagaagttggatgcggaagtcttg
ttatcagaagattcacactcacttttcaggaaagcagtctacagtggccttcgtcgatct
ttggactcaacctaa
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