Cucumis sativus (cucumber): 101216952
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Entry
101216952 CDS
T02486
Name
(RefSeq) protein GIGANTEA isoform X1
KO
K12124
GIGANTEA
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101216952
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NCBI-GeneID:
101216952
NCBI-ProteinID:
XP_011659108
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Position
7:13492017..13538598
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AA seq
1168 aa
AA seq
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MATSSERWIDRLQLSSLFWPPPDDDQQRKVQCSAYVEYLGQFTSERFSEDIAELIRIRFQ
SKEKRLFDDVLALFVLHHPENGHAIILPIISCIFDGALEYNRNDPPFASFISLFCPGIEN
DYSEQWALACGEILRILTHYNRPIYKMERKNGETERSSSGSRATTSDTDDRELVGVPQQQ
ERKPVRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTSASSRGSGKHPQL
IPSTPRWAVANGAGVILSVCDEEVARYETATLTAAAVPALLLPPPTTALDEHLVAGLPAL
EPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEEYATGIRL
PRNWMHLHFLRAIGTAMSMRAGISADAAAALLFRILSQPALLFPPLRQVEETDVQCESLG
GYDSSYREQIEVSAAEATIDATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSDLVD
LPDIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLVKIFVATVESILQRTYPSES
SREQSRKTRYFSSLGSASKNLAVTELRSMVHALFLESCASVELASRLLFVVLTVCVSHEA
QLNGSKKLRRSQSNLLDERIEDLQAVPENHTGLRRKTKKQGPVSAFDSYVLAAVCALACE
VQLFPFTARGSDHLNTRDLQDVIKLVKVNGTSTELQNSVGSAVCHTHRILAILEALFSLK
PSSVGTSWSYSSNEIVAAAMVAAHVSELFRRSRACMHALSILMRCKWDDEIYNRASSLYN
LIDIHSKAVASIVNEAEPLEAHLIQVPKWKESLIGLNGKRQIQYEDGTCFYPGQSSIQNC
DNSSYSETKLVFERASNSDEELGSTSVKGLASFSIDASDLANLLTMNRHIGFSCCAQVPL
RSVLAEKQALCFSVISLLWHKLISAPETQPSVESTSAQQGWRQVVDALCNVVSASPAKAA
TAIVLQAERELQPWIAKDDDQGQKMWRINQRIIKLIVELMRNHDTPESLVILASASDLLL
RATDGMLVDGEACTLPQLELLEVTARAVKPVLEWGESGLSIADGLSNLLKCRLSATVRCL
SHPSAHVRALSTSVLRDILHTSLIKSNSKSVNVNGIYPSYQYFSSGIIDWKADIEKCLGW
EVRSQLATGQSTQFLQAAAKELSCSISL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcgagtgagagatggatcgatagacttcaattatcctctttgttttggcct
cccccagatgatgatcagcaaaggaaggttcagtgttctgcatatgttgagtacttgggt
cagtttacatcagaacgattctcagaggacattgctgagctgattcggatccgtttccaa
tcgaaggaaaaacgcctgtttgatgatgttttagctttgtttgttcttcatcatcccgag
aatgggcatgctattattcttccaataatttcttgtatatttgatggcgccctggaatat
aacagaaatgatcctccatttgcctcttttatatccttattctgcccgggcattgagaac
gactattctgaacaatgggcccttgcatgtggggagattctgcgaatcttgactcattac
aatcgcccgatatacaagatggaacgaaaaaatggtgaaacagaaagaagcagtagtggc
agccgtgccacgacaagtgacaccgatgatagggaacttgttggagtgcctcagcaacaa
gagaggaaacctgtacgacctttgtccccctggattactgatatattgcttgctgcacca
ttgggcatcagaagtgactatttccgctggtgcagtggtgtaatgggtaaatatgctgct
ggagaactcaggccacccacatcagcttcttctcgtggatctggaaaacaccctcagctt
attccatcaactccaaggtgggctgttgcaaatggtgctggagtcatattaagtgtttgt
gatgaagaagttgcccggtatgagactgcaactcttacggcagctgctgttcctgcgctt
cttcttcctccccccacaacagctttggatgaacatttagttgcagggctaccagctctt
gagccatatgcacgcttatttcataggtattatgccattgctactccaagtgccacccaa
aggcttcttcttggactcttagaagcacctccatcttgggctccagatgcacttgatgca
gctgtacagcttgtagaactccttcgagctgctgaagagtatgcaactggcattaggctt
cctaggaactggatgcatttacatttcttgcgtgccattggcactgcaatgtccatgaga
gctggaatttctgctgatgctgcagcagccttgcttttccgcatactatcacaaccagcg
ttgctttttccaccactacgacaagttgaggaaactgacgttcagtgtgaatctttgggt
ggctatgattcatcatacagggaacagattgaagtgtctgcagcggaagctacaattgat
gctactgcacaaggaattgcgtccatgctttgtgcacatggtcctgaagttgagtggaga
atttgtacaatctgggaagctgcttatggcttgattccattaagttccgatttagttgac
ctccctgacatcatagttgcaacaccgttgcagcctcccatattatcatggaatttgtac
attcctctccttaaggttcttgaatatcttccacgaggtagcccgtctgaagcatgtctt
gtgaagatatttgttgctactgtggaatcaattcttcaaagaacatatccttctgagtct
tccagagaacaatctaggaaaacaagatacttttccagtcttggttctgcttctaaaaat
cttgccgtcacggagcttcggtccatggtccatgctcttttcttagaatcgtgtgcttct
gtggaacttgcttcacgcctactttttgttgtattgactgtttgtgttagtcatgaagct
caactcaatgggagcaagaaattgagacgttcacaaagtaatcttctggatgaaaggatt
gaggacttgcaagcagtacctgagaaccatacaggattaaggagaaagactaaaaagcaa
ggtcctgtttctgcatttgattcttatgtgctggctgctgtttgtgctcttgcctgtgag
gtccaattatttccctttactgctaggggaagtgatcatttaaacactagagatttacag
gatgtaattaaattggtcaaagtaaatggtacttcaaccgagcttcaaaacagtgttggc
tcagcagtatgccacactcaccgaattttggccatcttggaagcacttttttctttaaag
ccatcttctgtgggaacttcatggagttatagttcaaacgagatagttgctgcagcaatg
gttgcagctcatgtttcagaactctttagacgatcaagggcttgcatgcatgctctctct
atcctgatgcgatgcaagtgggacgatgaaatttacaacagggcatcatcattgtacaac
ctaatagatattcacagcaaagcagttgcttccattgttaatgaggctgaacctttagag
gcacatttaatacaagtaccgaaatggaaggaatctctcattgggttaaacggaaaaaga
caaattcaatacgaagatggtacctgcttttatcctggacaatcatctatccaaaattgt
gataattcatcctattcagaaactaaacttgtgtttgagcgagcatcaaattcagatgag
gagttgggtagcacttcagtgaaaggattagcaagcttctcaatagatgcttcagatttg
gccaacttactcacaatgaatagacatataggattcagctgttgtgcacaagttccgtta
agatcagtgcttgctgagaaacaagcattatgtttttctgttatttctctactgtggcac
aagttgatttccgcacctgaaactcaacctagtgtggagagcacttcggcccagcaagga
tggaggcaggtggttgatgcattatgcaacgtggtatcagcatccccagctaaagcggca
acagcaattgttcttcaggccgagcgggagttgcaaccatggattgcaaaagatgatgat
caaggtcagaagatgtggagaatcaaccagcggatcatcaaattgatagttgagctcatg
agaaatcatgatactccagaatcactagtcatattggcgagtgcctcagatctcctgttg
cgtgccacagatgggatgcttgtagatggagaagcatgtactttgccacaactagagcta
ttggaagtgactgctagagcagttaagcctgtactggagtggggagaatctggactttcc
attgctgacggcctttccaatctattaaagtgtcgtctatcggctactgttcgatgtctt
tctcatccaagtgcacatgttcgagctcttagcacatcagttcttcgtgatattctgcac
accagtttgataaagtctaattcaaaatcggttaacgtaaatggcatctatccctcttat
cagtatttcagttcaggtatcattgattggaaagcagatattgagaaatgcttgggatgg
gaagttcgtagtcaacttgcaactggacaatcaactcagtttcttcaagctgctgccaag
gaattaagctgctctatttccctatga
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