Cucumis sativus (cucumber): 101217046
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Entry
101217046 CDS
T02486
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101217046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101217046
03110 Chaperones and folding catalysts [BR:
csv03110
]
101217046
03029 Mitochondrial biogenesis [BR:
csv03029
]
101217046
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101217046
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101217046
Messenger RNA biogenesis [BR:
csv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101217046
Chaperones and folding catalysts [BR:
csv03110
]
Heat shock proteins
HSP60 / Chaperonin
101217046
Mitochondrial biogenesis [BR:
csv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101217046
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101217046
Exosomal proteins of other body fluids (saliva and urine)
101217046
Exosomal proteins of breast cancer cells
101217046
Exosomal proteins of colorectal cancer cells
101217046
Exosomal proteins of bladder cancer cells
101217046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
101217046
NCBI-ProteinID:
XP_004145436
UniProt:
A0A0A0LYB3
LinkDB
All DBs
Position
1:complement(32064555..32070639)
Genome browser
AA seq
606 aa
AA seq
DB search
MNLNYPLISSSLLYDANNLMEFSARLSSPAPFPQTLLFPLMKHGGSQRLSGYARNSWNIR
NFVVRAGPKRISFGKECRGALLAGIDKLADAVSVTLGPKGRNVILSEQKTLKVVNDGVTI
AKAIELSDAIENAGVVLIQEVASKMNDLAGDGTTTAIILAREMIKSGLLAVSFGADPVSL
KKGMDKTVKELIKVLKKKSTPVQGKDDIKAVAMISSGNDEYVGNLIAEAIEKIGPDGVIS
IESSKSSETSVIIEEGMKIDKGYMSPQFITNQDKSIVEFDNAKVLVTDQRISSVKEIVPL
LEKTVQLSLPLLIFAEDISIKVLETLVVNKIQGLVNVAVVKCPGVGERKKALLQDIALMT
GADFLSGDLGLGLEGATSDQLGIARKVVITSNSTTIVADPSTKDEIQARISQIKKDLVET
DNPNLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNAVFAAMNEGIVPGGG
ATYVHLYELLPTIKQSMEDQDELIGADIVGKALLAPAKLIASNAGDDGVVVVEKTRACDW
RHGYNAMTDKYEDLFNAGVVDPCLVSRCALQIAASVTGIVLTTQAVMVEKIKKPKPLVPH
VPGISP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaactacccactcatctcttcttctcttctctacgacgccaataacctcatg
gaattctctgcccgtctctcctcaccggctccctttccccaaactctactcttccctctg
atgaagcacggtgggagtcaaaggctatctgggtacgcgagaaattcatggaatatcaga
aactttgtcgttagggccggtcctaagaggatatcttttggtaaagaatgcagaggggcc
ttgctagctggtattgataagttggctgatgctgtttcggtcactttaggacctaaaggc
cgcaatgttattctctctgaacagaaaacgcttaaagtggttaatgatggggttacaatt
gcaaaagctatcgagctttctgatgcaattgagaatgcaggagtggttctgatccaagag
gttgctagtaaaatgaacgacttggctggagatggaaccaccaccgctataattttggca
cgtgaaatgatcaaatccggattattggcagtttcctttggggctgatccagtttcatta
aagaaaggaatggataagactgtaaaggagttgatcaaggttttaaagaagaaaagtact
cctgtacaaggaaaagatgatattaaagctgttgcaatgatatcttctggaaatgatgaa
tatgtggggaacttaattgctgaagcaattgaaaagattggccctgatggtgtgatctca
attgagtcatcaaaatcctctgaaacctcggtaataatagaggaaggaatgaagattgat
aaaggttatatgtcgcctcagtttattaccaaccaagataagtctattgtggagtttgac
aatgcaaaagtcctagtaaccgatcaaaggatttcttctgtcaaagaaattgttcctttg
ttggagaagactgtacaacttagtcttcctctgctgatatttgcagaggacatctcaata
aaagttctagagaccctagtggtgaacaagatacagggtttagttaatgtggctgttgta
aaatgtcctggggttggtgagagaaagaaggctctattgcaagatattgcgctgatgaca
ggtgctgattttctctctggagatttgggtctaggacttgagggtgcaacttcggaccag
cttggaattgctaggaaagtagttataacatctaattcaacaacaatagttgcagatccc
tctactaaagatgaaattcaagcaagaatttcacagattaagaaggatcttgttgaaaca
gataatcccaacctctcaagaaagctgtcggagaggattgctaaactttctggtggagtt
gctgtcatcaaggtgggagcacatacagaggtggaacttgaagacagaaaacttagaatt
gaggatgcaaagaatgctgtatttgctgctatgaatgaaggcattgttcctggtggaggt
gccacctatgttcatctgtatgaattgcttcctaccataaaacaatcaatggaagatcaa
gatgagctgattggtgctgatattgtgggcaaggcacttcttgctcctgcaaaactcatt
gctagtaatgcaggggatgatggagtagttgttgtggagaaaactcgagcatgcgattgg
cgacacgggtataatgcaatgacagacaaatatgaagatcttttcaatgctggtgtagta
gatccttgccttgtttccagatgtgcgcttcagattgcagcctcagttaccggaatcgtt
ttaaccactcaagctgtaatggtagagaaaataaagaagccaaagccactcgttccccat
gttcctggaatatctccatga
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