| Entry |
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| Name |
(RefSeq) plant-specific TFIIB-related protein 1
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| KO |
| K03124 | transcription initiation factor TFIIB |
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| Organism |
csv Cucumis sativus (cucumber)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csv00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101217129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:csv03021]
101217129
Transcription machinery [BR:csv03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
101217129
Prokaryotic type
Archaeal type
TFB
101217129
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:27305259..27309614
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| AA seq |
443 aa
MKCPYCSAAQGRCVTSSTGKSITECISCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
TPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSSN
LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKIDAFEGASLEKDK
PIETKPNISTEISEMSHPSRVKEDSESKFVSHGMYNPVTNKSSTFSQPHPPKGNSVAGFV
GKKSQTADTQGMDIVKDHSNSQQ |
|---|
| NT seq |
1332 nt +upstreamnt +downstreamnt
atgaagtgcccctactgctcggcggcacaggggcggtgcgtcacctccagcaccggcaag
tccatcacagaatgcatttcctgcggccgcgttgtcgaagagcgacaattccagccccat
cacctcttccaccttcgcgctcaagataatcccctttgtctcgtcacctccgacctcccc
acccctcccgtccaccaccagaacgatcaggttttggatcctttcgagcccaccggcttc
attacagccttctccacttggtccttggagcacaatccactcttcttccgctcctgcttc
tccttctccggccaccttgcggagctcgagcgtaccctagagtctacctcgtcatccaat
ttgccgtcctcgtctacggtcgtggtcgataaccttagggcttatatgcagattatcgat
gtagcttctcttttggggttggattactatatttccgagcacgcgtttaagttgtttaga
gattgttgttcggctacttgtttaaggaaccgaagcgttgaggcgcttgccactgctgcc
cttgtccaggctattagagaggcccaggagccccgaacccttcaggaaatctccattgca
gcgaatgtaccgcaaaaagagatagggaagtacatcaagattttgggagaagctttgcaa
ttaagtcaacccatcaacagcaattccatatcagttcatatgccaaggttctgcacgctt
ctccaactcaataaatctgcacaggaactggcaactcacataggggaagttgtcatcaac
aaatgcttctgcactcgcaggaatcccattagcatctcagctgctgcaatatacttagct
tgccaattagaagacaagcgtaagacgcaagcagaaatttgtaaggttacaggtctcact
gaagtcaccctccggaaagtttacaaggagctactagaaaattgggatgatttgcttccg
tctaattatactcctgctgttcctccagaaagggcatttcccacaactgtaattgcttca
ggccgttctgcagctcctaaaattgatgcatttgaaggggcttctttagagaaagacaag
ccaatagagactaaacctaatatatccaccgagatctcagaaatgagtcatccatccaga
gtcaaggaagatagtgagagtaaatttgtatcccatgggatgtacaaccctgtaactaac
aaatcgtcaactttctctcaaccacaccctcctaaagggaattctgttgcaggttttgtt
gggaagaagagtcaaactgctgatacccagggaatggatattgttaaggatcactccaac
agccaacagtaa |
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